Query= MSMg01no451_h01.b1 MSMg01no451_h01.b1 CHROMAT_FILE:
MSMg01no451_h01.b1 PHD_FILE: MSMg01no451_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:41 2005
(635 letters)
>mm_chr3_62530918_62531949
Length = 1032
Score = 1189 bits (615), Expect = 0.0
Identities = 626/631 (99%), Gaps = 3/631 (0%)
Strand = Plus / Plus
Query: 5 gaattccaataagcagatgaaactaaaacaaagagagaaatacagtagttttggccacca 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattccaataagcagatgaaactaaaacaaagagagaaatacagt---tttggccacca 261
Query: 65 tagctatatgtaggatgtacatttggcaactgcagccatcttcaaaaatgttggaggaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tagctatatgtaggatgtacatttggcaactgcagccatcttcaaaaatgttggaggaaa 321
Query: 125 aacctcctaaagagccaaagtagaaatgggagtcagtgacttgaagctctcatattggtg 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aacctcctgaagagccaaagtagaaatgggagtcagtgacttgaagctctcatattggtg 381
Query: 185 ctagtaccactctactcatccatgatcatgtatgtttaccccacccaacagaaaatcagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctagtaccactctactcatccatgatcatgtatgtttaccccacccaacagaaaatcagt 441
Query: 245 agcaaacatgaagttaaaatatactttgatgaaacatagacttcagtagaaaatagaatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agcaaacatgaagttaaaatatactttgatgaaacatagacttcagtagaaaatagaatc 501
Query: 305 aaggtgtgagtagacaatgagtattttgcacaaacctactcaataaattttctgaagatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aaggtgtgagtagacaatgagtattttgcacaaacctactcaataaattttctgaagatt 561
Query: 365 taaaatagaatcaaaaccaaaatgaagcaccagatgtaggatctacaagaggattttgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 taaaatagaatcaaaaccaaaatgaagcaccagatgtaggatctacaagaggattttgtg 621
Query: 425 aaacctggatttgatccatggcttgatcacttactgacaatttaatttcatgattaatag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaacctggatttgatccatggcttgatcacttactgacaatttaatttcatgattaatag 681
Query: 485 gatatttatgtacccagatttactgtttgcagaaaggtaattctaatgttgcattttcta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gatatttatgtacccagatttactgtttgcagaaaggtaattctaatgttgcattttcta 741
Query: 545 gattccaaggagaatgttcatttgtgattgttgtttaccagaagcctgtcttgcagtttc 604
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gatcccaaggagaatgttcatttgtgattgttgtttaccagaagcctgtcttgcagtttc 801
Query: 605 acacattatgtcaacttagtgtcagcattta 635
|||||||||||||||||||||||||||||||
Sbjct: 802 acacattatgtcaacttagtgtcagcattta 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1032
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1022
Effective search space: 638750
Effective search space used: 638750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_h01.g1 MSMg01no451_h01.g1 CHROMAT_FILE:
MSMg01no451_h01.g1 PHD_FILE: MSMg01no451_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:41 2005
(158 letters)
>mm_chr3_62656355_62656912
Length = 558
Score = 306 bits (158), Expect = 6e-88
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 1 cttagtgctattctattcatatgaaactaaagaaaatatgaaatcaaaacagaaacttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cttagtgctattctattcatatgaaactaaagaaaatatgaaatcaaaacagaaacttgt 299
Query: 61 gaaaattgtattcagctgcatcaaaattttattttaaatgtcacagagaaaaatagtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gaaaattgtattcagctgcatcaaaattttattttaaatgtcacagagaaaaatagtcac 239
Query: 121 tcttagttttgttctaaaatatttcagtaaaataaaaa 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tcttagttttgttctaaaatatttcagtaaaataaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
