NNNNTTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTAATAGCATTATGGTAGATTTTTCTATATGAAGCTTTT
AGTAGTTTTGGCTTGATGTCCACTTTTTAAAATATTAGAATATATGTGTT
TGCTTATTATTTCCTAATTCCATTTACTTCATGGACTTTTCCCCATATTT
TAAGCTTAAAGAAATCTGCATCATTGATAATGAGATGTATTTCTTGGAGG
GTATGAAAAAACAGACCTGAAAAGCTTCAGAATAATGAAGATAAAAATCA
ATGCTGCTCAAGGAGTTACAAGTTTATGACAGTTTATTGAATGAAGGGAA
GATCATGTTTCATAGTGACAGGCTTCTTCTACCCTACCAAGGTTTGCCCT
CTTGTTTTCAAAGAGACCCATTTACTATTTTAAGGATAAGTACACAGGGA
AAGGAAATAATCAGAGCTTTGGGATCTTATTAGAAACTAATATTGAACTG
CCATGGATTCCATGGATCGTCCAAAACCACGTGGCTCTCCATTCACTGTG
TGTGTCAGATTGTTAATAAGTCCTTGATGCAAATCTGACTCACAGTTGGA
ACAGTGGTTTCTTGACACACATCTATGACTAATTCCCCAATCTCAGTATG
TATACTTGGCATAGATAAACTTACAAGTTAGTATAAACACAAAATTTAAT
GCTTTGTACAAGGTGACAAATATGGGTCTATTTTCATTCCTCTACATACA
AAGAGCCAAT

NNCCCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACACTTCAGCAGTTAGGCTGC
CAACCACAGAGGTCATCTTTGGTGTTTAGTGCCAAGGAAGAAATAGTTTC
AAGTCCTTTGAAAAGCCATCCAGTCCAGGACCCCACCACGAAGGTATTCT
TCATTTTCTACATCAGGAGAAACTGGTAGTTTCAAAAAGGGTTTTAATTT
GTTTCCTTCAAAGCACGTGAATTAATTCTTAACATCACCACTGGCCTCAT
GAAATGTAACCCCTGTTAATAATGTTCAATGCTGCTCAACTCAAGAAAAC
AATCTTTATACAGTTACAGTGGGGGACATGCTCAGGGGTACATGTCAGAA
AAATATCTAGGGAGACTTCTTTGTTATGAGAGAGGTTTTATGTTCTGTTC
CATCTAGTAGTTTTACCTCTTTTTGGAAAACGATCATATTTCAAGAAATA
CACTAAGATTTACTTTGTTTCCAGTAACGTTTTGATGTTTCCAATGTTAC
TTGGTTTTCTTAAGAACTATGTCCAAAAGCTTGGTGTTGTTTTACCTAAG
ATAGAATTGAACTTCTAGTAATGCTACAAATTAGAAAAAAAAATCCAAAA
TGTGGATTGTATCTCCTTCAAACCTACTTAAGATAATATACAAAGTAATG
GATTTCACTGTAGTATTTTTGATATATAGAACTTATTTTTCTATAAACCC
CATCCAACATATCAGAA

Query= MSMg01no452_n22.g1 MSMg01no452_n22.g1 CHROMAT_FILE:
MSMg01no452_n22.g1 PHD_FILE: MSMg01no452_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:34 2005
         (575 letters)



>mm_chr3_124283237_124284211
          Length = 975

 Score = 1089 bits (563), Expect = 0.0
 Identities = 572/575 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcacacttcagcagttaggctgccaaccacagaggtcatctttggtgtttagtgccaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tcacacttcagcagttaggctgccaaccacagaggtcatctttggtgtttagtgccaagg 716

                                                                       
Query: 61  aagaaatagtttcaagtcctttgaaaagccatccagtccaggaccccaccacgaaggtat 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aagaaatagtttcaaatcctttgaaaagccatccagtccaggaccccaccacgaaggtat 656

                                                                       
Query: 121 tcttcattttctacatcaggagaaactggtagtttcaaaaagggttttaatttgtttcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcttcattttctacatcaggagaaactggtagtttcaaaaagggttttaatttgtttcct 596

                                                                       
Query: 181 tcaaagcacgtgaattaattcttaacatcaccactggcctcatgaaatgtaacccctgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tcaaagcacgtgaattaattcttaacatcaccactggcctcatgaaatgtaacccctgtt 536

                                                                       
Query: 241 aataatgttcaatgctgctcaactcaagaaaacaatctttatacagttacagtgggggac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aataatgttcaatgctgctcaactcaagaaaacaatctttatacagttacagtgggggac 476

                                                                       
Query: 301 atgctcaggggtacatgtcagaaaaatatctagggagacttctttgttatgagagaggtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atgctcaggggtacatgtcagaaaaatatctagggagacttctttgttatgagagaggtt 416

                                                                       
Query: 361 ttatgttctgttccatctagtagttttacctctttttggaaaacgatcatatttcaagaa 420
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 415 ttatgttctgttccatctagtagttttacctctttttggaaaatgatcatatttcaagaa 356

                                                                       
Query: 421 atacactaagatttactttgtttccagtaacgttttgatgtttccaatgttacttggttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 355 atacactaagatttactttgtttccagtaacgttttgatgtttccaatgttacatggttt 296

                                                                       
Query: 481 tcttaagaactatgtccaaaagcttggtgttgttttacctaagatagaattgaacttcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tcttaagaactatgtccaaaagcttggtgttgttttacctaagatagaattgaacttcta 236

                                              
Query: 541 gtaatgctacaaattagaaaaaaaaatccaaaatg 575
           |||||||||||||||||||||||||||||||||||
Sbjct: 235 gtaatgctacaaattagaaaaaaaaatccaaaatg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)