TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTTAGCTCTGTACCTCAATTTTTAATGGGGTTATTTGATTT
TTCTGGAGTCCACCTCCTTGAGTTCTTTGTATATGTTGGATATTAGTCCC
CTATCAGATTTAGGATTGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT
TTTTGTCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTA
TGAGGTCCCATTTATCAATTCTCAATCTTACAGCACAAGCCATTGCTGTT
CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCCAC
TCTCTCCTCTATAAGTTTTAGTGTCTCTGGTTTTATGTGAAGTTCTTTGA
TCCACTTAGACTTGAGCTTTGTACAAGGAGATAAGACTGGATCAATTCAC
ATTCTTCTACATGATAACTGCTAGTTGAGCCAGCACCATTTGTTGAAAAT
GCTGTACACACAACTCAGTCTAGATGTGCACATAGCTCAGTCTAGACGTA
CACACAGTTCAGTCTAGATGTGCACACAGCTCAGTCTAGGTGTGCACACA
TAGGGACAACATCTCACAGAAATAGCTCTGTTTCTCACCACTTACTAAGT
AAGGTGTTTTGTCAATGATTCATCTGCACTGANGAATGTAAACGGGCCTG
ATGGGGCTTTAGTATTCTTTTGTCCATCATCCACCATTTCAGTTGAATAC
CAGAAACAAGGAG

CATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTAAATTATTTAGATAACAGATAT
TTTTCCAGAACCAGCTATGTGTTGGGAAAATGTCCTAGACACTCTGTTAA
TCAACACAAATCAGAGAGGATAGTCAGCATGACTGAGGAATCTGCTGTCA
GGGACTGGGAATCTTGACTATTGAAAATCTGCCTAAACAAGACCTGAACA
AGATTATACTAACATGGAAGTGGGAGATCTGTTGGATCCCCAACCCGAGA
CAAAGCTGAGAGCAGGAGAAATAACCTTCCCCAGGGTAGGAACCCTAGTT
GGTAAACAATACCAAGTGGTCAGCACTGAATTTGTAGAGATAAAATTAAT
AGCAATGGGTCTGAGCAGGTTGTGTTTAGTTATTTAGACACATATAACAA
TAGTAATTGAAAAAGAGAAGGCTATGATTTAAAAGGGGAGCAAGCAAGAA
GGTTACATGTGAGGGGATAGAGATAGGAAAGGCAGGGGTAAAATTAAGTA
CTTAGATTTTAATCTCAAGACAAATTTTAAAGAAGACAAATAGCAGAAGA
GTGCTGGTAAAATTTAATTGGGTTAACAAAATTTTACTGGTTTTAATAGG
ACATTTTAGTTTTAATAGTAATCATTGTAGATGTCGGAGAGAGTTGTATA
TGTACACCTATTGTGGAAGCAAAAAACTGCCATTGCAGGTTGTGATGGTA
AGCATTG

Query= MSMg01no453_c20.g1 MSMg01no453_c20.g1 CHROMAT_FILE:
MSMg01no453_c20.g1 PHD_FILE: MSMg01no453_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:57 2005
         (545 letters)



>mm_chr3_156128947_156129891
          Length = 945

 Score = 1007 bits (521), Expect = 0.0
 Identities = 540/547 (98%), Gaps = 2/547 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttaaattatttagataacagatatttttccagaaccagctatgtgttgggaaaatgtcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cttaaattatttagataacagatatttttccagaaccagctatgtgttgggaaaatgtcc 258

                                                                       
Query: 61  tagacactctgttaatcaacacaaatcagagaggatagtcagcatgactgaggaatctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 259 tagacactctgttaatcaacacaaatcagagaggatagtcagcatgactgaggaacctac 318

                                                                       
Query: 121 tgtcagggactgggaatcttgactattgaaaatct--gcctaaacaagacctgaacaaga 178
           |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 319 tgtcagggactgggaatcttgactattgaaaatctctgcctaaacaagacctgaacaaga 378

                                                                       
Query: 179 ttatactaacatggaagtgggagatctgttggatccccaacccgagacaaagctgagagc 238
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 379 ttatactaacatggaagtgggagatctgatggatccccaacccgagacaaagctgagagc 438

                                                                       
Query: 239 aggagaaataaccttccccagggtaggaaccctagttggtaaacaataccaagtggtcag 298
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 439 aggagaaataaccttccccagggaaggaaccctagttggtaaacaataccaagtggtcag 498

                                                                       
Query: 299 cactgaatttgtagagataaaattaatagcaatgggtctgagcaggttgtgtttagttat 358
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cactgaatttgtagagataaagttaatagcaatgggtctgagcaggttgtgtttagttat 558

                                                                       
Query: 359 ttagacacatataacaatagtaattgaaaaagagaaggctatgatttaaaaggggagcaa 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttagacacatataacaatagtaattgaaaaagagaaggctatgatttaaaaggggagcaa 618

                                                                       
Query: 419 gcaagaaggttacatgtgaggggatagagataggaaaggcaggggtaaaattaagtactt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gcaagaaggttacatgtgaggggatagagataggaaaggcaggggtaaaattaagtactt 678

                                                                       
Query: 479 agattttaatctcaagacaaattttaaagaagacaaatagcagaagagtgctggtaaaat 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agattttaatctcaagacaaattttaaagaagacaaatagcagaagagtgctggtaaaat 738

                  
Query: 539 ttaattg 545
           |||||||
Sbjct: 739 ttaattg 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)