Query= MSMg01no453_l23.b1 MSMg01no453_l23.b1 CHROMAT_FILE:
MSMg01no453_l23.b1 PHD_FILE: MSMg01no453_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:43 2005
(624 letters)
>mm_chr3_58280651_58281674
Length = 1024
Score = 656 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Plus
Query: 286 tgcaaccaatacctagcactatcttccagctaattacataaacacccatgccattacctt 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgcaaccaatacctagcactatcttccagctaattacataaacacccatgccattacctt 545
Query: 346 tcttgcttccaatatttaagttgtccttgacaaccaacccttccttgatacggttttcaa 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcttgcttccaatatttaagttgtccttgacaaccaacccttccttgatacggttttcaa 605
Query: 406 ttggactagatattatgatggacatagataccaaataagtgggctgagattggctgcctt 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ttggactagatattatgatggacatagataccaaataagtgggctgagattggctgcctt 665
Query: 466 tgcttattatgatgcaatggtcctggcatatcaaaaggtgaatcagccttcatgggcggt 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgcttattatgatgcaatggtcctggcatatcaaaaggtgaatcagccttcatgggcggt 725
Query: 526 ggtctttatctcctggccaatgactgacaggtccagctcctttaaatcttaagggatgag 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ggtctttatctcctggccaatgactgacaggtccagctcctttaaatcttaagggatgag 785
Query: 586 acaataaaaaatagtctgtaatgctctgatctctaggac 624
|||||||||||||||||||||||||||||||||||||||
Sbjct: 786 acaataaaaaatagtctgtaatgctctgatctctaggac 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_l23.g1 MSMg01no453_l23.g1 CHROMAT_FILE:
MSMg01no453_l23.g1 PHD_FILE: MSMg01no453_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:43 2005
(577 letters)
>mm_chr3_58307488_58308462
Length = 975
Score = 891 bits (461), Expect = 0.0
Identities = 505/525 (96%), Gaps = 11/525 (2%)
Strand = Plus / Minus
Query: 1 cagtccctccagagccacacagtgagaccttgtctcaaaccaaacaaataaaataaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 cagtccctccagagccacacagtgagaccttgtctcaaaccaaacaaataaaataaaaag 455
Query: 61 ataatctcttgtgtgtgtaaatttccacttatgctgcttctcaggaagtgaataactaca 120
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 454 ataatctcttgtgtgtgtaaatttccacttatgctgtttctcagaaagtgaataactaca 395
Query: 121 ttaatatttttaataatgacacattgccaccctgtgttcagtttctgcaaatactaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttaatatttttaataatgacacattgccaccctgtgttcagtttctgcaaatactaatct 335
Query: 181 tacagagccatctgttagttacatctggaaacagcagcagcagaaaggacacacagctga 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 334 tacagagccatctgttagttacatctggaaacagcagcagcagaaaggagacacagctga 275
Query: 241 gaatattctgaggagcagccactctttggagctattctcagggaaagacatagaaaagaa 300
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 274 gaatattctgaggagcagccattctttggagctattctcagggaaagaca--gaaaagaa 217
Query: 301 tttcaggataaaccagtgtactggctggctttatgagtcaaccagatacaaaagtagagt 360
||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||
Sbjct: 216 tttcaggataaaccagtatactggctggctttatgagtcaaccagacacaaa------gt 163
Query: 361 catcagagaggaaggagcctcagctgaggaaatgcctttatgagatccagctataaggca 420
|| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 162 ca---gagaggaaggagcttcagctgaggaaatacctttatgagatccagctataaggca 106
Query: 421 ttttctcaattagtgatcaatggggagaacctaacccacagtggtgtcatccctggttgg 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 105 ttttctcaattagtgatcaatggggagaacctaacccactgtggtgtcatccctggttgg 46
Query: 481 tggtcttctgttctgtagaaagcaggctaagcaagccaaggagag 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tggtcttctgttctgtagaaagcaggctaagcaagccaaggagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 975
Length adjustment: 10
Effective length of query: 567
Effective length of database: 965
Effective search space: 547155
Effective search space used: 547155
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
