NACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACCCATTTTTTATTTATATCATTTTAAGAGTACAAGGATTA
CAGATGTATGCCGCCAAAATCCAAGTTATTTCATGCCTTATGTGTGTTGA
ACTCGGATGGTAAGAATTGCATGACAGACCCTTAGTGAGCCATCTTCCCT
GTCCAAATTTCTTCTTTCATATTCTACAACTATTGGTCCTATCTTTCTTG
GATGTCTATAGACAGGCCACCCATGTGCAGAATATTTGTGTAGGCTATGA
CCTTGGTATTCTTCTGTCCATAACTCTGCTTCTCATTCCAGTCTGAAGAT
TCCCACAGATCTGGAATGAAGTACCCTGAAAACACATCTAGTCTCATGTA
TTTTCCAATTAAGAAGTCTTTATCTGGTGTATAAGTAGGGTGATCTACCA
GAACATCTAGTAATGTTCTGTATACAAATGAATGAAAGTCTATGTTCTAA
GGCAATCTTTCTGTCTTTTCCCGCCTATTTTAGCATTATTCACAATAGTA
GGAGTTTAGAAGCAACCTCGTGAGACAAGAAAACCATTATTCTTCAATAC
TTCCCATATGTGCAAAAATCATTGAATCTTGAAGCCATTCCATGTCCTAT
GAAAGAACTCTATAACATCAGAATGCCACTGCCTTGTTGGGCAGGGCTTA
AGAAAAGGGCTGAAGATTAAAGATAAGTAAAATGTAAGAATGTTCCTTTG
GCAGCTCTT

ACAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCAGTTTAGTTCTATACCCCATTTT
TTTTATTGGGTTGTTTGGTTTTTAGTTGGTTAGCTTCTTGATTTCTTTAT
ATACTTTGGATATTAGCCCTCTATTGGACTTGGGGTTAGTGAAGATTTTT
TCTAATCTGTAGGTTGCCGATTTGTCTTATTGACTATATCCATTGCCTTA
CAGAAGCTTTCCAGTTTCATGAGATCCCATTTATCAATTCTTATTCTTAG
AGCATGAGCCATTGGAGTTCTGTTTAGGAAATTTCCCCGTGCCGATAAAT
TCAAGGCTCTTTTCCACTTTCTCTTATACTAGATACAGTGTATCTGGTTT
TATGTTGAGGTCCTTGATCCACTTGGACTTGAGCATTGTGGAAGGTGACA
AATATGGTTCTATTTTTGTTTCTTATATATTTTCTCAGAATGTATGAATA
CATGGCATCTAACTCAGAAGTTCACTATGAGTTTAAACATAAATTAAAAT
CATAAATTGAATAGGAAGTTTATAACATAGATATTTATATGTGTTTTCAT
ACCTAGACATCTATTTTGTGTCACTAACTCTTCAGGTTCATTGAAAGTTA
AAAACCATAATTTGTGTGACTAAGTTGGCATTGAGACTTTGTGTAGATAG
ACCCAGTCTTTTTCTTCCTGGGGCTGGAGAGATTGCTCAGTGTGTAAGAA
AGAA

Query= MSMg01no453_p14.b1 MSMg01no453_p14.b1 CHROMAT_FILE:
MSMg01no453_p14.b1 PHD_FILE: MSMg01no453_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:01 2005
         (647 letters)



>mm_chr3_16193797_16194843
          Length = 1047

 Score = 1236 bits (639), Expect = 0.0
 Identities = 642/643 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacccattttttatttatatcattttaagagtacaaggattacagatgtatgccg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacccattttttatttatatcattttaagagtacaaggattacagatgtatgccg 264

                                                                       
Query: 65  ccaaaatccaagttatttcatgccttatgtgtgttgaactcggatggtaagaattgcatg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaaaatccaagttatttcatgccttatgtgtgttgaactcggatggtaagaattgcatg 324

                                                                       
Query: 125 acagacccttagtgagccatcttccctgtccaaatttcttctttcatattctacaactat 184
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acagacccttagtgatccatcttccctgtccaaatttcttctttcatattctacaactat 384

                                                                       
Query: 185 tggtcctatctttcttggatgtctatagacaggccacccatgtgcagaatatttgtgtag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggtcctatctttcttggatgtctatagacaggccacccatgtgcagaatatttgtgtag 444

                                                                       
Query: 245 gctatgaccttggtattcttctgtccataactctgcttctcattccagtctgaagattcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctatgaccttggtattcttctgtccataactctgcttctcattccagtctgaagattcc 504

                                                                       
Query: 305 cacagatctggaatgaagtaccctgaaaacacatctagtctcatgtattttccaattaag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cacagatctggaatgaagtaccctgaaaacacatctagtctcatgtattttccaattaag 564

                                                                       
Query: 365 aagtctttatctggtgtataagtagggtgatctaccagaacatctagtaatgttctgtat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagtctttatctggtgtataagtagggtgatctaccagaacatctagtaatgttctgtat 624

                                                                       
Query: 425 acaaatgaatgaaagtctatgttctaaggcaatctttctgtcttttcccgcctattttag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acaaatgaatgaaagtctatgttctaaggcaatctttctgtcttttcccgcctattttag 684

                                                                       
Query: 485 cattattcacaatagtaggagtttagaagcaacctcgtgagacaagaaaaccattattct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cattattcacaatagtaggagtttagaagcaacctcgtgagacaagaaaaccattattct 744

                                                                       
Query: 545 tcaatacttcccatatgtgcaaaaatcattgaatcttgaagccattccatgtcctatgaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcaatacttcccatatgtgcaaaaatcattgaatcttgaagccattccatgtcctatgaa 804

                                                      
Query: 605 agaactctataacatcagaatgccactgccttgttgggcaggg 647
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agaactctataacatcagaatgccactgccttgttgggcaggg 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)