Query= MSMg01no454_p10.b1 MSMg01no454_p10.b1 CHROMAT_FILE:
MSMg01no454_p10.b1 PHD_FILE: MSMg01no454_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:20 2005
(390 letters)
>mm_chr3_82070721_82071515
Length = 795
Score = 638 bits (330), Expect = 0.0
Identities = 372/388 (95%), Gaps = 5/388 (1%)
Strand = Plus / Minus
Query: 8 gaattcttt-ctaacctcctgcttttggttttgttttgtttttgcttttcaagctcttaa 66
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaattctttcccaacctcctgcttttggttttgttttgtttttgcttttcaagctcttaa 536
Query: 67 gatgtatcatttattaatttgtttgagttctctctaattttaaaaatgtaggtgcttaat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gatgtatcatttattaatttgtttgagttctctctaattttaaaaatgtaggtgcttaat 476
Query: 127 atttctgtgattttgctgactttgtagtgtttgttgtttgtctttagctctgcttttttt 186
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 475 atttctgtgattttgctgactttgtagtgtttgttgtttgtttttagctctgcttttttt 416
Query: 187 cctgtagcctcttggtttgctcttcttttcttcagtctgaagaaactctttcagtcgtct 246
||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 415 cctgtagcctcttagtttgcttttcttttcttcagtctgaagagtctctttcagtcgtct 356
Query: 247 ctgtagggcttcattggtttggttttatttataaaatcttatttctccttccagatattt 306
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 355 ctgtagggattcattggtttggtggtatttataaaatcttatttctccttccagatattt 296
Query: 307 ttgatatgcatagttgtcttggcatctgtcatttttctg----ttttttttgtatctgtc 362
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 295 ttgatatgcatagttgtcttggtatctgtcatttttctgggttttttttttgtatctgtc 236
Query: 363 atttttcaaaatttgaggttctgaaaat 390
||||||||||| ||||||||||||||||
Sbjct: 235 atttttcaaaacttgaggttctgaaaat 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 795
Length adjustment: 9
Effective length of query: 381
Effective length of database: 786
Effective search space: 299466
Effective search space used: 299466
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_p10.g1 MSMg01no454_p10.g1 CHROMAT_FILE:
MSMg01no454_p10.g1 PHD_FILE: MSMg01no454_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:20 2005
(200 letters)
>mm_chr3_81922663_81923262
Length = 600
Score = 379 bits (196), Expect = e-110
Identities = 199/200 (99%)
Strand = Plus / Plus
Query: 1 ctctgttgcggcttgtctttctttgggggagactcccttctgcattcttctcaggaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctgttgcggcttgtctttctttgggggagactcccttctgcattcttctcaggaaagt 260
Query: 61 cctggcagatgggcagagtagcctggcagccctcagagcctccagccacctcctctgttg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actggcagatgggcagagtagcctggcagccctcagagcctccagccacctcctctgttg 320
Query: 121 gctccttaggaacctgaccaggggccagtaaggagaaaggacactcccctgtgatcttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctccttaggaacctgaccaggggccagtaaggagaaaggacactcccctgtgatcttga 380
Query: 181 gatccttgaacttcctgcag 200
||||||||||||||||||||
Sbjct: 381 gatccttgaacttcctgcag 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
