Query= MSMg01no455_k14.b1 MSMg01no455_k14.b1 CHROMAT_FILE:
MSMg01no455_k14.b1 PHD_FILE: MSMg01no455_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:14 2005
(592 letters)
>mm_chr3_18389840_18390832
Length = 993
Score = 1067 bits (552), Expect = 0.0
Identities = 582/592 (98%), Gaps = 1/592 (0%)
Strand = Plus / Plus
Query: 2 cactgttcttccaaaggacatcatccataattgccaactgccctatgtgacttagctttt 61
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 202 cactgttcttccaaaggacatcatccataattgccaactgtcctatgtgacttggctttt 261
Query: 62 tgtaggtaattcatgggtcatgtttatgcaaaaggaatattaaattaatataaatatata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgtaggtaattcatgggtcatgtttatgcaaaaggaatattaaattaatataaatatata 321
Query: 122 aaactaggttcaaaatagattattttggtaatcatatcagatgatatagtaactccaaag 181
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaactaggttcaaaataggttattttggtaatcatatcagatgatatagtaactccaaag 381
Query: 182 ctcttccaatttataaaagcaataagatattgacaaaatacagataaacttttgttagaa 241
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctgttccaatttataaaagcaataagatattgacaaaatacagataaacttttgttagaa 441
Query: 242 tttataaagtagtcaaaagcttttaacaatgcagaaattactgtattcaagaaaaagttg 301
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cttagaaagtagtcaaaagcttttaacaatgcagaaattactgtattcaagaaaaagttg 501
Query: 302 tatttcacaatacaatttaataatgtgttgagattcatgacacattagctcaccctacac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tatttcacaatacaatttaataatgtgttgagattcatgacacattagctcaccctacac 561
Query: 362 ccattctgaaagccctagtctcaatggtagacttgaaaatttcagtattcctaatatgag 421
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 562 ccattctgaaagccctagtctcaatggtagacttgaaattttcagtattcctaatatgag 621
Query: 422 aactgggaagagcaggaggctgtattagctgagaattgttatcatttgttctgaccagtg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aactgggaagagcaggaggctgtattagctgagaattgttatcatttgttctgaccagtg 681
Query: 482 tggctccgagctccaccagaactcacatcacactacagaaacagtaatgggtaaggaggg 541
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 682 tggctccgagctccaccagaactcacatcacactacagaaacagtagtgggtaagaaggg 741
Query: 542 ttagaagctaaggtgagtgtattgcttaaaaa-tatttctaggcaaatggtt 592
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 742 ttagaagctaaggtgagtgtattgcttaaaaaatatttctaggcaaatggtt 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 993
Length adjustment: 10
Effective length of query: 582
Effective length of database: 983
Effective search space: 572106
Effective search space used: 572106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_k14.g1 MSMg01no455_k14.g1 CHROMAT_FILE:
MSMg01no455_k14.g1 PHD_FILE: MSMg01no455_k14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:14 2005
(375 letters)
>mm_chr3_18546580_18547354
Length = 775
Score = 590 bits (305), Expect = e-173
Identities = 368/415 (88%), Gaps = 40/415 (9%)
Strand = Plus / Minus
Query: 1 attcccgagcttcctcccagcttcctccttccctacctttcccatccctcagccggtcat 60
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 435 attcccgagcttcctcccagcttcctccttccctagctttcccaaccctcagccggtcat 376
Query: 61 cagcctgttacattttcacctaaaatcatttgactcactgctcactcttctggtcactcc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cagcctgtcacattttcacctaaaatcatttgactcactgctcactcttctggtcactcc 316
Query: 121 tagcaaaggtcaacctgtggcaaaaaggaagcttcactctatcccttcatcctaccccca 180
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tatcaaaggtcaacctgtgacaaaaaggaagcttcactctatcccttcatcctaccccca 256
Query: 181 tccctataaatatccctagtctgcaagccaagtgacctttttggtttcccagt------- 233
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttcctataaatatccctagtctgcaagccaagtgacctttttggtttcccagtctgaaga 196
Query: 234 ---------------------------------ctctgttgtagaagctgtttcttatag 260
|||||||||||||||||||||||||||
Sbjct: 195 tgtccatgacacaggttgttgcccatgaacccactctgttgtagaagctgtttcttatag 136
Query: 261 gcctttcactccactgatctttgaacaggagttcttaacacttaagtgttgatgggagta 320
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 135 gcctttcactccactgatctttgaacaggagttcttaacacctaagtgttgatgggagta 76
Query: 321 tttgcagctgtccttctataggatttctttttaagagggcagtcaaaatttaggc 375
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 tttgcagctgtccttctataggatttctttttaagagggcagtcaaaatttaggc 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
