Query= MSMg01no455_p09.b1 MSMg01no455_p09.b1 CHROMAT_FILE:
MSMg01no455_p09.b1 PHD_FILE: MSMg01no455_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:36 2005
(625 letters)
>mm_chr3_101954862_101955886
Length = 1025
Score = 1060 bits (548), Expect = 0.0
Identities = 587/600 (97%)
Strand = Plus / Minus
Query: 26 gaccctttaatacagtctctaatgttgtggtgattcccaaccatacatttattttggttg 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gaccctttaatacagtctctaatgttgtggtgattcccaaccatacatttattttggttg 966
Query: 86 ctacttcatagcacaattttgctctgctatgaatcataatgtagatatctgtattttttc 145
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 965 ctacttcataacacaattttgctctgctatgaatcataatgtagacatctgtattttttc 906
Query: 146 cgatggtcttagaagattcctgagaaaggtcactcaacccttccccaaaggggccatgac 205
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 905 cgatggtcttagaagattcctgagaaagatcattcaacccttccccaaaggggccatgac 846
Query: 206 ccaaaggttgagaactgctgatgtaggccttgcctaactgccagcctacaaaaacatcaa 265
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 845 ccaaaggttgagaactgctgatgtaggccttgccaaactgccagcctacaaaaacatcaa 786
Query: 266 acaacagacccttgcctagagaattagttatggcgctgagacacttgacgcacagtgaca 325
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 785 acaacagacccttgcctagagaattagttatggcgctgagacacctgatgcacagtgaca 726
Query: 326 agttcagttcatgctatattacaagtactgtagtggaagcacgtggcatagctaggagcc 385
||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 725 agttcagttcacgctatattataagtactgtagtggaagcatgtggcatagctaggagcc 666
Query: 386 aggaagggagatatagcccttgccttcaggtgctgttgcccctccgttatagacatgaag 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aggaagggagatatagcccttgccttcaggtgctgttgcccctccgttatagacatgaag 606
Query: 446 gaatagtcatctagtatgatcactgtgcctaaaaatgggaccacaaaaacctctaatgtt 505
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 605 gaatagtcatctagtatgatcactgtgcctaaaaatgggaccacaaaaacctgtaatgtt 546
Query: 506 aataatatcttatttttataaaggttactccatgctttaacttttcagatcctctggaac 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aataatatcttatttttataaaggttactccatgctttaacttttcagatcctctggaac 486
Query: 566 accaaaagtatgacctgcttaactaaagttaattttaactgttcacagagtgcgggacac 625
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 485 accaaaagtatgacctgcttaactaaagttaattttaagtgttcacagagtgtgggacac 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_p09.g1 MSMg01no455_p09.g1 CHROMAT_FILE:
MSMg01no455_p09.g1 PHD_FILE: MSMg01no455_p09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:37 2005
(575 letters)
>mm_chr3_101755221_101756197
Length = 977
Score = 1029 bits (532), Expect = 0.0
Identities = 565/582 (97%), Gaps = 12/582 (2%)
Strand = Plus / Plus
Query: 1 caagtctttcagcttgactacctcaaaatcttccattcttttttttt--cccttcagatt 58
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 caagtctttcagcttgactacctcaaaatcttccattctttttttttttcccttcagatt 260
Query: 59 tccatgttctaaattgccagttaattaacctctatttgaaggtacatttatatatttaat 118
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 tccatgttctaaattgtcagttaattaacctctatttaaaggtacatttatatatttaat 320
Query: 119 ttcatttcccacccccaaaagcaagttacctataatttgaaatattctcttactttagaa 178
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcgtttcccacccccaaaagcaagttacctataatttgaaatattctcttactttagaa 380
Query: 179 tattcaggggcttgcaagactaattagaaaatggaaatttcctacaagggaa-----ttt 233
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tattcaggggcttgcaagactaattagaaaatggaaatttcctacaagggaagcacattt 440
Query: 234 tttttctgtaacaggaagcacagttcacctccttccagctccatgtgcagcagcagcctg 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 -----ctgtaacaggaagcacagttcacctccttccagctccatgtgcagcagcagcctg 495
Query: 294 gctgccctttcatggaagactcttgtctccttggagtggaacaaacacctttccatgggg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gctgccctttcatggaagactcttgtctccttggagtggaacaaacacctttccatgggg 555
Query: 354 tactgttcactaagtgctgttctggacccttctcagatgatactttgctgagtgagttca 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tactgttcactaagtgctgttctggacccttctcagatgatactttgctgagtgagttca 615
Query: 414 ttcactttatcctgcaggtagaaataaacagccagccagccttacagatgacaaaatgaa 473
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 616 ttcactttatcctgcaggtagaaatgaacagccagtcagccttacagatgacaaaatgaa 675
Query: 474 gttcagagaactcgaggcatttgaactcaagctgcatggcagcttcccatattctttgct 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gttcagagaactcgaggcatttgaactcaagctgcatggcagcttcccatattctttgct 735
Query: 534 cagccatcatctctgttaggccagcacagggaagtgccctcg 575
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cagccatcatctctgttaggccagcacagggaagtgccctcg 777
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 977
Length adjustment: 10
Effective length of query: 565
Effective length of database: 967
Effective search space: 546355
Effective search space used: 546355
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
