Query= MSMg01no456_d03.b1 MSMg01no456_d03.b1 CHROMAT_FILE:
MSMg01no456_d03.b1 PHD_FILE: MSMg01no456_d03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:56 2005
(587 letters)
>mm_chr3_123577321_123578307
Length = 987
Score = 1104 bits (571), Expect = 0.0
Identities = 580/583 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaattattcgaattattttgtttcattaatataataagggaaatgtaataatct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaattattcgaattattttgtttcattaatataataagggaaatgtaataatct 264
Query: 65 ccaaggtagagagaagtcttcaaagtagggtcacctgaggttacttccttgaaagtagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaaggtagagagaagtcttcaaagtagggtcacctgaggttacttccttgaaagtagaa 324
Query: 125 gtagtacactcaggactttctctgccacacgcagaagcaattttgtcaatgaagatatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtagtacactcaggactttctctgccacacgcagaagcaattttgtcaatgaagatatat 384
Query: 185 ggatgaatcattactgtaatagaccccagagagtgtaatacccacagtcaaaccagaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggatgaatcattactgtaatagaccccagagagtgtaatacccacagtcaaaccagaaat 444
Query: 245 aaatgacatcaggttgagggctgcagcatgtggctcagcttgggtgggactttgtcacac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatgacatcaggttgagggctgcagcatgtggctcagcttgggtgggactttgtcacac 504
Query: 305 agctgcgctggcttcatgactttcaccattctcctaggaaatggccatgtcgttcaccat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agctgcgctggcttcatgactttcaccattctcctaggaaatggccatgtcgttcaccat 564
Query: 365 taaattccagagggtaactgagagcactggcaaaagtctgtaacatttgggaatgttgga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 565 taaattccagagggtaactgagagcactggcaaaagtctgtaacatttgggaacgttgga 624
Query: 425 atctcactggccatcaactccaaaataagccaagcattctgaaactgggctatttattta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atctcactggccatcaactccaaaataagccaagcattctgaaactgggctatttattta 684
Query: 485 tttatttttattgctagcctgtggtgtctaatagatgcaccactgcctgcttaatgccgt 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 685 tttatttttattgctagcctgtggtgtctaatagatgcaccactgcctgcttaatgccat 744
Query: 545 tcaaattctttttatatacatttggagatagattataagcttc 587
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 745 tcaaattctttttatatacatttggagatagattatgagcttc 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_d03.g1 MSMg01no456_d03.g1 CHROMAT_FILE:
MSMg01no456_d03.g1 PHD_FILE: MSMg01no456_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:56 2005
(122 letters)
>mm_chr3_123811816_123812341
Length = 526
Score = 209 bits (108), Expect = 5e-59
Identities = 120/126 (95%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 1 taagttaaaataacaacagtatttttgagcaatatataattttttcctgaaactttgagt 60
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 326 taagttaaaataacaacagtatttttgagcaatatagaattttttcctgatactttgagt 267
Query: 61 tgatgtgtgtgtgcttgg----gtgtgtgtgtgtgtataattacttctcatttctatatt 116
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgatgtgtgtgtgcttgggtgtgtgtgtgtgtgtgtataattacttctcatttctatatt 207
Query: 117 attata 122
||||||
Sbjct: 206 attata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 526
Length adjustment: 8
Effective length of query: 114
Effective length of database: 518
Effective search space: 59052
Effective search space used: 59052
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
