TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACCCTTAACAACAGAATGACACAAAGGTGAAGAACTGAAAATAGTA
CCAACAAGCCAGAAAATGGCTCTTGCATTGTGGGATAAAAATATACAGTA
GATGGAAATACATGGTAACAGCACAACTTGTGCTGAGTTGAGTTGTATTA
AATGATGCAAGAGTTGCTCATGTAATATTTGTTTTAAATTATACAAGACA
CATGGTATCTGATCACCCTTTGTGCCATGAAGTAAGTTTGTCTTGTCTAC
TCACATGGTCTTTATCAAGGATCTGGTCTCGGTTGTAGTAGAGAATGACA
GAAGATTGGGAAAATGCATTTTCTAGTCTTTGAGTAACAGGTTTTTCTAG
AGAGAGCTGAGAAAGAAAGGAAGAATTCCTTAGTCTTCAGGCACACCTAT
GATGGAGATTAACTCATGCACTTCTGGTTCTACTGGTCTTATAACCACCC
TCTCCTATATCATTGTCTGCTGCATTTACCTTATTTATTTCTTCAGAGCC
AAAGACTCTGGATAGGGCATTTGTCTTAATGTCAAGAGCATTATTCTTAA
GTTCAGAATTCCACATCCTAGGTACTTCAGTGGCTGTACAGTCCTTTAGC
ACCGATCAAGACAAGAACTTGCTCCCTGAAAAAGCCAGGTTGAGAGAATT
TTGATAGAAATTCCCTCTTGGTTTGACTGAATACAAACTAAT

NCACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTGGGTTTGTTGTGGCTTCATTTT
CATTAAACTCTAAAAAGTCTTTAATTTCTTTCTTTATTTCTTCCTTGACT
GAGTTATCATTGAGTAGATTATTGTTTAGCTTCCACTTGTATGTGAGTTT
TCTATTATTTATGTTGTTATTGAAGATCAGCCTTAGTCCAAGGTGATCTG
ATAGGGTGCATGGGATTATTTCTATATTTTTGTATCTGCTGAGGCCTGTT
TGACGACCAATTATATGGTCAATTTTGGAGAAGGTACTATAAGGTGCTGA
GAAGAAGATATATCCTTTTGTTTTGGGATGAAATGTTCTATAGTTATCTA
TTAAATCCATTTGTTTCATAACTTCTGTTAGTTTCAATGTGTCTCTGTTT
AGTTTGTTTCCAGGATTTGTACACTGATGAAAGTAAGGTGTTGAAGTCTC
CCACTATTATCGTGTGAGGGGCAGTGTGTGCTTTGAGCCTTAGCAAATAT
TCTTTACTGAATGTGAATGCACTTGCATTTGGAGTTTAGATTGGTCACAT
TGGAAGTTCTTCTATATATCTTTTTATCTTTACGGGGTACAAGTGTTCCT
TCCTAATTTTTTTTTTTTCACCTCTGTGGTTATCGCCGCATTTTCCCCGG
TTTAATTAGGGCCCTCTTTTTACTGCTTTTTTTTTTACCTCCTGTAGGAA
TACTTTTTTN

Query= MSMg01no456_f08.b1 MSMg01no456_f08.b1 CHROMAT_FILE:
MSMg01no456_f08.b1 PHD_FILE: MSMg01no456_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:07 2005
         (555 letters)



>mm_chr3_155687030_155687984
          Length = 955

 Score =  996 bits (515), Expect = 0.0
 Identities = 542/551 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacccttaacaacagaatgacacaaaggtgaagaactgaaaatagtaccaacaag 64
           ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gaattcacccagaagaacagaatgacacaaaggtgaagaactgaaaatagtaccaacaag 696

                                                                       
Query: 65  ccagaaaatggctcttgcattgtgggataaaaatatacagtagatggaaatacatggtaa 124
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 695 ccagaaaatggctcttgcattgtgggataaaaatatacagtagaaggaaatacatggtaa 636

                                                                       
Query: 125 cagcacaacttgtgctgagttgagttgtattaaatgatgcaagagttgctcatgtaatat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cagcacaacttgtgctgagttgagttgtattaaatgatgcaagagttgctcatgtaatat 576

                                                                       
Query: 185 ttgttttaaattatacaagacacatggtatctgatcaccctttgtgccatgaagtaagtt 244
           ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 575 ttgttttaaattatacaagacacatggaatctgatcaccatttgtgccatgaagtaagtt 516

                                                                       
Query: 245 tgtcttgtctactcacatggtctttatcaaggatctggtctcggttgtagtagagaatga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tgtcttgtctactcacatggtctttatcaaggatctggtctcggttgtagtagagaatga 456

                                                                       
Query: 305 cagaagattgggaaaatgcattttctagtctttgagtaacaggtttttctagagagagct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cagaagattgggaaaatgcattttctagtctttgagtaacaggtttttctagagagagct 396

                                                                       
Query: 365 gagaaagaaaggaagaattccttagtcttcaggcacacctatgatggagattaactcatg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gagaaagaaaggaagaattccttagtcttcaggcacacctatgatggagattaactcatg 336

                                                                       
Query: 425 cacttctggttctactggtcttataaccaccctctcctatatcattgtctgctgcattta 484
           ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cacttctggttctactggtcacataaccaccctctcctatatcattgtctgctgcattta 276

                                                                       
Query: 485 ccttatttatttcttcagagccaaagactctggatagggcatttgtcttaatgtcaagag 544
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 275 ccttatttatttcttcagagccaacgactctggatagggcatttgtcttaatgtcaagag 216

                      
Query: 545 cattattctta 555
           |||||||||||
Sbjct: 215 cattattctta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)