Query= MSMg01no456_i21.b1 MSMg01no456_i21.b1 CHROMAT_FILE:
MSMg01no456_i21.b1 PHD_FILE: MSMg01no456_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:25 2005
(338 letters)
>mm_chr3_27806450_27807187
Length = 738
Score = 594 bits (307), Expect = e-174
Identities = 331/339 (97%), Gaps = 2/339 (0%)
Strand = Plus / Plus
Query: 1 cattaatgagagaaagaaaagaaagcaaaatgaataggctgactcttctggatgatgcaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 cattaatgagagaaagaaaagaaagcaaaatgagtaggctgactcttctggatgatgcaa 260
Query: 61 cttctgcatagctaagactggggacatgctcataggggcaagaaacaggaaaatccatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 cttctgcatagctaagactggggacatgctcataggggcaagaaacaggaaaacccatga 320
Query: 121 aaacagggatgcgagatagcaaaccatgggaaccctagcacccaggtacagaggcttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacagggatgcgagatagcaaaccatgggaaccctagcacccaggtacagaggcttgta 380
Query: 181 tttataacccagtactggaaaggcagagatgggatgatctctggtggtctctggtgagcc 240
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 tttataacccaatactggaaaggcagagacgggatgatctctggtggtctctggtgagcc 440
Query: 241 -gttgcctaatcctgcatagccatgatagggactgctaaacatgtttcccacctctggaa 299
|| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 agt-gcctaatcctgcatggccatgatagggactgctaaacatggttcccacctctggaa 499
Query: 300 cagaaccagctggggatgagcctccatgaatcttgatgg 338
|||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cagaaccagctggggatgagcctccatgaatcttgatgg 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_i21.g1 MSMg01no456_i21.g1 CHROMAT_FILE:
MSMg01no456_i21.g1 PHD_FILE: MSMg01no456_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:25 2005
(245 letters)
>mm_chr3_27991774_27992418
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Minus
Query: 1 tttgaagatgaactagtgaatacaaaggccaggcagctgcttctttgtccccctttggat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 572 tttgaagatgaactagtgaatacaaaggccaggcagctgcttctttttccccctttggat 513
Query: 61 tccctggaaaatgagaggtggtagaactattgtctcccatatccaaggacctgggttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tccctggaaaatgagaggtggtagaactattgtctcccatatccaaggacctgggttcaa 453
Query: 121 tccccagtgtttcacggaatgagacaagcaaatggaaaaatcagaactggcctagatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tccccagtgtttcacggaatgagacaagcaaatggaaaaatcagaactggcctagatccc 393
Query: 181 tgctttcagcctttaagcaataaacagccacagttctgggaaaagatttagagatgaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgctttcagcctttaagcaataaacagccacagttctgggaaaagatttagagatgaatg 333
Query: 241 tttat 245
||||
Sbjct: 332 cttat 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
