Query= MSMg01no456_l17.b1 MSMg01no456_l17.b1 CHROMAT_FILE:
MSMg01no456_l17.b1 PHD_FILE: MSMg01no456_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:39 2005
(187 letters)
>mm_chr3_84434389_84434977
Length = 589
Score = 315 bits (163), Expect = 9e-91
Identities = 179/185 (96%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 5 ctgcactgctcctttcctgt--gtgatcctctcgcccccagtgaattctctagctaatga 62
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctgcactgctcctttcctgtctgtgatcctctcgcccccagtgaattctctagctaatga 264
Query: 63 ctgtgagtgatgtctgcgcgataaagattagaaagattagaaagctggaagtggaatccg 122
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtgagtgatgtctgcgtgataaagattagaaagattagaaagctggaagtggaatccg 324
Query: 123 tgtcttcactcctcatttcctacactgaaggccctgtctctgaggaggaagagacagagc 182
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgccggcactcctcatttcctacactgaaggccctgtctctgaggaggaagagacagagc 384
Query: 183 acagc 187
|||||
Sbjct: 385 acagc 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 589
Length adjustment: 8
Effective length of query: 179
Effective length of database: 581
Effective search space: 103999
Effective search space used: 103999
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no456_l17.g1 MSMg01no456_l17.g1 CHROMAT_FILE:
MSMg01no456_l17.g1 PHD_FILE: MSMg01no456_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:39 2005
(175 letters)
>mm_chr3_84579335_84579909
Length = 575
Score = 323 bits (167), Expect = 4e-93
Identities = 173/175 (98%)
Strand = Plus / Minus
Query: 1 agatgagccaacgctgctagctgtgttaggggagtaactggtcaaacatcctgaaggggt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 375 agatgagccaacgctgctagctgtgttaggggagtaactgggcaaacatcctgaaggggt 316
Query: 61 gggtggggccaggtggatgaccaccagctgcctgctacccactgtactggaaaacaattt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gggtggggccaggtggatgaccaccagctgcctgctacccactgtactggaaaacaatta 256
Query: 121 ttttccccaaaattcctgttcctacctccttaacctgttttcagacttataaact 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttttccccaaaattcctgttcctacctccttaacctgttttcagacttataaact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
