Query= MSMg01no457_m22.b1 MSMg01no457_m22.b1 CHROMAT_FILE:
MSMg01no457_m22.b1 PHD_FILE: MSMg01no457_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:09 2005
(394 letters)
>mm_chr3_134684475_134685269
Length = 795
Score = 725 bits (375), Expect = 0.0
Identities = 387/391 (98%), Gaps = 1/391 (0%)
Strand = Plus / Plus
Query: 5 gaattctgaagagtatt-attgctaaggcccctttctctcttgcccagaagtctcgcctc 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgaagaggatttattgctaaggcccctttctctcttgcccagaagtctcgcctc 264
Query: 64 tcactggccaggtgagaggaagatttgatgcaataactattttttaaaatttttattaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcactggccaggtgagaggaagatttgatgcaataactattttttaaaatttttattaga 324
Query: 124 tatattcttcatttacatttcaaatgctatcccaaaagtcccctataccatctcccgccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatattcttcatttacatttcaaatgctatcccaaaagtcccctataccatctcccgccc 384
Query: 184 tgctccccaacccacccactcccacttcttggccctggcattcccctgtactggggcata 243
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tactccccaacccacccactcccacttcttggccctggcattcccctgtactggggcata 444
Query: 244 taaagtttacaagaccaaggggcctctcttcccaatgatgtccaactaggccttcttctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taaagtttacaagaccaaggggcctctcttcccaatgatgtccaactaggccttcttctg 504
Query: 304 ctacatatgcatctagaggcatgagctctgggggtactgattagttcatattgttgttcc 363
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctacatatgcatctagaggcacgagctctgggggtactgattagttcatattgttgttcc 564
Query: 364 acctatagggatgtagaccccttcagctcct 394
|||||||||||||||||||||||||||||||
Sbjct: 565 acctatagggatgtagaccccttcagctcct 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 795
Length adjustment: 9
Effective length of query: 385
Effective length of database: 786
Effective search space: 302610
Effective search space used: 302610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_m22.g1 MSMg01no457_m22.g1 CHROMAT_FILE:
MSMg01no457_m22.g1 PHD_FILE: MSMg01no457_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:10 2005
(338 letters)
>mm_chr3_134819135_134819872
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 324/329 (98%)
Strand = Plus / Minus
Query: 1 aaagtttgtgatttgtaggtaagataaataaaatccacatctaactagatatagggtaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaagtttgtgatttgtaggtaagataaataaaatccacatctaactagatatagggtaga 403
Query: 61 aaaagaggaagattatgagccattaatggaaatagtcaccctttatataagctgtgagtc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 402 aaaagaggaagattatgagccattaatggaaatagtcaccctttatataagccgtgagtc 343
Query: 121 acctaatgattgaaccacttaatgtaaggaaaaaaattacccacaatttgatatatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 342 acctaatgattgaaccacttaatgtaaggaaaaaaattacccacaatttgatacatatat 283
Query: 181 gaaattcccattctcctggggatgtctactgccatagtatctagtgtctccattctaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaaattcccattctcctggggatgtctactgccatagtatctagtgtctccattctaggg 223
Query: 241 ggcacagttagattccactgcaatgaccaccccatagtatggttgagagaaaggttttat 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ggcacagttagaaaccactgcaatgaccaccccatagtatggttgagagaaaggttttat 163
Query: 301 tgtgaataagagacagaanatatccagag 329
|||||||||||||||||| ||||||||||
Sbjct: 162 tgtgaataagagacagaaaatatccagag 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
