MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-459B05
Chromosome	3 (Build37)
Map Location	15,222,018 - 15,222,409
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985
Downstream gene	LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG622229 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622229 MGI:3648364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins

name	LOC668062 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668062
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Slc7a12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140918 MGI:2156159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668068 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins pseudo : _no_value

name	Lrrcc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71710 MGI:1918960
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E2f5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13559 MGI:105091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810022K09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69126 MGI:1916376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 1 Protein

name	LOC100039929 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039929
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Car13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71934 MGI:1931322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG545507 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545507 MGI:3645250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Car1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12346 MGI:88268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 180 ESTs, 1 Protein

name	Car3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12350 MGI:88270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Car2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12349 MGI:88269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG634323 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634323 MGI:3647002
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039985 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC751864 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:751864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sirpb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320832 MGI:2444824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC668101 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 14 Proteins

name	LOC100038947 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 28 ESTs, 10 Proteins

name	LOC622425 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622425
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC664795 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664795
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC381484 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:381484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ythdf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229096 MGI:1918850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040034 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	EG622229 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369224 GeneID:622229 MGI:3648364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : predicted gene, EG622229 transcript_id : XM_886644.2

name	Slc7a12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366209 GeneID:140918 MGI:2156159
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 transcript_id : NM_080852.2

name	Lrrcc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365220 GeneID:71710 MGI:1918960
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat and coiled-coil domain containing 1 transcript_id : NM_028915.2

name	E2f5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982404 GeneID:13559 MGI:105091
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E2F transcription factor 5 transcript_id : NM_007892.2

name	1810022K09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250626 GeneID:69126 MGI:1916376
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs, 1 Protein product : RIKEN cDNA 1810022K09 gene transcript_id : XM_001477090.1

name	Car13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227225 GeneID:71934 MGI:1931322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 13 transcript_id : NM_024495.4

name	EG545507 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250605 GeneID:545507 MGI:3645250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG545507 transcript_id : XM_994159.2

name	Car1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227230 GeneID:12346 MGI:88268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 1 transcript_id : NM_009799.3

name	LOC100041785 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250628 GeneID:100041785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 180 ESTs, 1 Protein product : similar to cytochrome c oxidase, subunit VIc transcript_id : XM_001477158.1

name	Car3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131196 GeneID:12350 MGI:88270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 3 transcript_id : NM_007606.3

name	Car2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981656 GeneID:12349 MGI:88269
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anhydrase 2 transcript_id : NM_009801.3

name	LOC100039985 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250607 GeneID:100039985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039985 transcript_id : XM_001473894.1

name	LOC751864 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:141802305 GeneID:751864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SIRP beta 1 like 2 transcript_id : NM_001076679.2

name	Sirpb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41282034 GeneID:320832 MGI:2444824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-regulatory protein beta 1 transcript_id : NM_198405.1

name	Sirpb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50872162 GeneID:320832 MGI:2444824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-regulatory protein beta 1 transcript_id : NM_001002898.1

name	Sirpb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373246 GeneID:320832 MGI:2444824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal-regulatory protein beta 1 transcript_id : NM_178792.3

name	LOC668101 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94369231 GeneID:668101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 14 Proteins product : similar to SIRP beta 1 transcript_id : XM_994308.1

name	LOC100038947 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250809 GeneID:100038947
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 28 ESTs, 10 Proteins product : similar to SIRP beta 1 cell surface protein transcript_id : XM_001471956.1

name	LOC381484 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:126157463 GeneID:381484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SIRP beta 1 like 1 protein transcript_id : NM_001081687.1

name	Ythdf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46048311 GeneID:229096 MGI:1918850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : YTH domain family 3 transcript_id : NM_172677.2

name	LOC100040034 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250833 GeneID:100040034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001473985.1

name	EG622229 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82800429 GeneID:622229 MGI:3648364
definition	codon_start : 1 product : similar to Solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 protein_id : XP_891737.1

name	Slc7a12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18252792 CCDS:CCDS17246.1 GeneID:140918 MGI:2156159
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0015171 - amino acid transporter activity [Evidence IDA] GO_process : GO:0006865 - amino acid transport [Evidence IDA] codon_start : 1 note : Asc-2,asc-type amino acid transporter 2 product : solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 protein_id : NP_543128.1

name	Lrrcc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794168 GeneID:71710 MGI:1918960
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : leucine rich repeat and coiled-coil domain containing 1 protein_id : NP_083191.1

name	E2f5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982405 GeneID:13559 MGI:105091
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005635 - nuclear envelope [Evidence TAS]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence TAS]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : E2F transcription factor 5 protein_id : NP_031918.2

name	1810022K09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250627 GeneID:69126 MGI:1916376
definition	codon_start : 1 product : hypothetical protein LOC69126 protein_id : XP_001477140.1

name	Car13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13374567 CCDS:CCDS17247.1 GeneID:71934 MGI:1931322
definition	GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : carbonic anhydrase 13 protein_id : NP_078771.1

name	EG545507 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250606 GeneID:545507 MGI:3645250
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999253.2

name	Car1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116063531 CCDS:CCDS17248.1 GeneID:12346 MGI:88268
definition	GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006730 - one-carbon compound metabolism [Evidence IEA] codon_start : 1 note : CA I product : carbonic anhydrase 1 protein_id : NP_033929.2

name	LOC100041785 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250629 GeneID:100041785
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477208.1

name	Car3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982861 CCDS:CCDS17250.1 GeneID:12350 MGI:88270
definition	GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016151 - nickel ion binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006730 - one-carbon compound metabolism [Evidence IEA] codon_start : 1 product : carbonic anhydrase 3 protein_id : NP_031632.2

name	Car2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981657 CCDS:CCDS17251.1 GeneID:12349 MGI:88269
definition	EC_number : 4.2.1.1 GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0015670 - carbon dioxide transport [Evidence IMP]; GO:0002009 - morphogenesis of an epithelium [Evidence IMP]; GO:0006730 - one-carbon compound metabolism [Evidence IEA]; GO:0046903 - secretion [Evidence IMP] codon_start : 1 exception : mismatches in translation note : CA II product : carbonic anhydrase 2 protein_id : NP_033931.3

name	LOC100039985 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250608 GeneID:100039985
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473944.1

name	LOC751864 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:115511059 GeneID:751864
definition	codon_start : 1 product : SIRP beta 1 like 2 protein_id : NP_001070147.1

name	Sirpb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41282035 GeneID:320832 MGI:2444824
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003823 - antigen binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IDA]; GO:0050766 - positive regulation of phagocytosis [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 2 is encoded by transcript variant 2; SIRP beta 1; SIRP-beta B; SIRP beta 1 cell surface protein product : SIRP beta 1 isoform 2 protein_id : NP_940797.1

name	Sirpb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50872163 CCDS:CCDS17252.1 GeneID:320832 MGI:2444824
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003823 - antigen binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IDA]; GO:0050766 - positive regulation of phagocytosis [Evidence IDA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; SIRP beta 1; SIRP-beta B; SIRP beta 1 cell surface protein product : SIRP beta 1 isoform 3 protein_id : NP_001002898.1

name	Sirpb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520271 GeneID:320832 MGI:2444824
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003823 - antigen binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IDA]; GO:0050766 - positive regulation of phagocytosis [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 1 is encoded by transcript variant 1; SIRP beta 1; SIRP-beta B; SIRP beta 1 cell surface protein product : SIRP beta 1 isoform 1 protein_id : NP_848907.1

name	LOC668101 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94369232 GeneID:668101
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999402.1

name	LOC100038947 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250810 GeneID:100038947
definition	codon_start : 1 product : similar to SIRP beta 1 cell surface protein protein_id : XP_001472006.1

name	LOC381484 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:126157464 GeneID:381484
definition	codon_start : 1 product : hypothetical protein LOC381484 protein_id : NP_001075156.1

name	Ythdf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46048312 GeneID:229096 MGI:1918850
definition	codon_start : 1 exception : mismatches in translation product : YTH domain family 3 protein_id : NP_766265.2

name	LOC100040034 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250834 GeneID:100040034
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001474035.1

name	LOC668062 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668062
definition	number : 2 pseudo : _no_value

name	LOC668062 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668062
definition	number : 1 pseudo : _no_value

name	LOC668068 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668068
definition	number : 2 pseudo : _no_value

name	LOC668068 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668068
definition	number : 1 pseudo : _no_value

name	LOC100039929 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039929
definition	number : 1 pseudo : _no_value

name	EG634323 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634323
definition	number : 1 pseudo : _no_value

name	LOC622425 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622425
definition	number : 1 pseudo : _no_value

name	LOC664795 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664795
definition	number : 4 pseudo : _no_value

name	LOC664795 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664795
definition	number : 3 pseudo : _no_value

name	LOC664795 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664795
definition	number : 2 pseudo : _no_value

name	LOC664795 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664795
definition	number : 1 pseudo : _no_value

clone name	MSMg01-315E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379G24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-383J18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-304E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065M01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-378M03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-501H07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-236J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145L19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-330A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-330A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-456O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405A15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-194F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-395N06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-108F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-045M03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-306A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-106C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484P11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351K01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-546K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325H08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-459B05.T7 (MSMg01no459_b05.b1)	MSMg01-459B05.TJ (MSMg01no459_b05.g1)
ACC	AG544756	AG544757
length	729	757
length of high quality (start - end)	391 (52 - 442)	330 (83 - 412)
definition	CHROMAT_FILE: MSMg01no459_b05.b1 PHD_FILE: MSMg01no459_b05.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:31:51 2005	CHROMAT_FILE: MSMg01no459_b05.g1 PHD_FILE: MSMg01no459_b05.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:31:51 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNGTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XCGCGGAATTCCAGTTTTATGTTCAGGAAAGATGCAGTTTAAGTGGTGTT TTTATAAAGCAAGAAAACAGCCATATGCAACAGATTCTATGGAAGAACAT TTGAGACTCCAACAAGTCTAAACTCAGTTAGTGGGCAGTAGATTGTGAAA CTGGTACAAATCAGATAGTCCTCAGGAAAAAAGATAGAAGCATCAAACCT TTCTCTGGGAGTGAGAAATGTTAGATTATCTACATACATCAAGTAGCCCT TACCTGTCCTTATCTACAAGCATCTCTCCTCACCAGCCCTCACTCTTGAA GTCAAGGTTGGAAAACTTCCTGGTGTCCAGGGCAATATTTTAGCCACAAC TGGCAAACTTTCCTGCTGCGCCACTATCGTAGAGAATGGTGTGAGCTCCA GCAGAGTGACATATATTGTATACCATTGGCAGCATGGAATGAGCACAAAT CAGTCCAAGAACCTGACATAGCACAGATTCCCTAATTGATGCCATGTGAG ATCCGAGAGATTCGCATCATGCTCTCATTTCCATGACTGGTACCTTAGAG AATGCTGGTTATGCTACCACAGCACCTCCGCCTCTTGTGTAAAGAAGCGG ATTCCTCCTGTTTCTATTTTTTTCCCCTTTCTTCTCTGCTTCCCTATTTC TTTTGCTTCTTGTCGCTTTTTCAATCATG	TTCTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGA ATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGA AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGG CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAA AGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACT CTGGAAATCCGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGG AGGATCCAGCAATACCTCTCCTGGGCATTTATCCAGAAGATGCCCCAACT GGTATGAAGGACACATGCTCCACTATGTTCCTAGTAGTCTTATTTATAAT AGCCTTAAGCTGGATACAACCCTTATGTCCCTCTACACAGGACTGTTTAC CTACACCGTGGTCACATTTACACTATGGAGCACTACCTCCGCCTTTATTT CTGACTGTACCTTTCCTATTTTCTATCCCCTCGGGGCGGGCCCTGTATCG TTTTTCCTTTTTTACTCTTTCTTTGTTTTTTTTTTCCCCCCCGCCTTTCC ATTTCCATCCCGCTTCCCTTGACTATGCTGTTTTTCCTCTCCTCTTTCTT TCTCGCTTTCCCCTCAACCTCTTATCTCCCTCGTCTTTTTCCCTCCTTCT CCTTTAC
quality values	Open. Hide. 0 0 3 8 8 12 14 12 8 8 8 8 8 17 33 34 37 37 27 25 25 37 37 37 37 37 37 37 37 37 39 23 19 14 8 7 6 8 6 6 7 10 15 20 32 34 26 28 26 26 28 35 41 53 53 30 29 28 28 28 25 17 13 10 10 12 15 15 12 12 21 21 29 31 31 36 36 57 57 42 39 39 47 47 42 57 57 57 48 59 47 43 43 39 39 32 30 30 33 42 46 54 54 54 54 54 48 48 48 48 48 47 43 43 46 43 44 57 46 48 48 48 57 57 57 57 57 43 43 43 47 47 48 54 57 57 57 57 57 57 57 57 59 68 68 68 68 68 57 57 50 50 57 57 57 57 59 57 57 47 57 57 57 57 57 57 57 59 59 59 57 59 59 59 57 52 59 59 59 68 68 57 57 52 52 52 59 59 68 68 57 57 57 57 57 57 57 68 57 68 57 57 57 59 57 68 68 68 68 68 57 57 57 57 57 57 57 52 59 52 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 54 54 62 62 62 62 62 68 68 68 68 68 68 68 59 59 57 44 43 43 42 45 52 57 57 57 59 57 57 52 52 52 57 59 57 57 57 57 57 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 59 52 59 52 54 54 57 57 57 57 57 68 57 57 57 57 59 57 68 68 68 68 68 59 59 59 43 42 35 44 44 42 42 35 42 30 35 37 42 47 44 46 44 48 42 44 37 43 39 44 41 27 27 14 14 14 27 32 47 43 34 30 14 14 18 28 40 59 44 43 39 31 31 13 13 11 16 16 22 25 25 22 25 37 30 30 29 32 43 47 48 48 48 37 28 21 13 12 10 10 10 10 19 20 37 30 28 19 19 11 12 12 21 21 31 36 25 16 16 11 11 11 17 11 9 8 10 10 8 8 8 10 10 11 20 23 32 36 26 19 10 11 11 11 15 13 10 9 9 9 12 15 18 24 15 14 8 8 8 8 8 10 13 14 12 11 11 11 16 16 13 13 10 11 11 15 15 18 11 11 9 9 9 9 15 12 14 14 12 9 9 9 9 8 8 8 8 10 12 14 10 10 12 10 10 10 10 12 16 13 13 19 10 12 12 19 21 25 25 19 19 12 12 11 10 15 16 11 10 10 12 12 17 18 9 9 9 9 12 12 6 8 6 6 8 8 8 8 10 8 8 8 8 8 11 11 11 11 11 11 15 16 15 10 10 10 8 8 6 6 8 7 8 10 9 9 9 11 9 9 9 9 13 10 10 8 8 9 9 10 10 10 11 13 8 8 8 8 8 8 10 10 10 8 8 8 6 6 8 6 6 8 15 13 15 11 12 10 10 10 10 10 9 8 8 8 8 8 8 10 13 12 10 10 17 21 16 11 13 12 12 8 8 8 8 8 8 8 8 8 9 9 11 12 14 14 11 16 14 12 11 11 11 10 10 10 10 10 11 11 11 10 10 9 9 10 9 12 10 11 10 12 10 9 9 9 9 9 6 8 6 6 8 6 6 8 8 17 13 10 8 8 8 8 8 6 6 6	Open. Hide. 11 11 11 11 9 9 8 9 11 8 8 8 8 8 15 22 27 21 28 30 37 37 41 37 25 23 10 10 10 23 18 19 25 16 12 9 10 10 12 13 11 16 15 17 22 22 26 26 36 36 44 44 53 53 36 36 36 33 33 33 37 59 30 21 10 9 10 9 10 10 11 13 22 28 41 48 31 36 36 36 50 50 47 47 47 47 36 37 37 37 47 40 43 43 47 57 50 57 54 54 54 48 48 48 48 54 54 54 57 68 68 68 57 57 57 50 57 57 57 68 68 50 48 42 41 41 41 57 57 57 57 47 57 57 57 57 57 57 57 57 57 47 47 50 50 50 50 50 57 50 50 50 57 57 57 57 57 57 57 57 50 57 57 57 50 57 52 52 52 57 50 50 50 50 50 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 54 59 59 59 57 52 57 57 57 57 57 59 59 57 52 52 57 57 57 59 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 62 62 62 62 62 59 68 68 68 68 68 59 59 57 57 57 57 57 57 57 59 57 57 59 52 52 52 59 59 59 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 57 57 52 52 52 52 52 52 52 52 57 57 57 57 57 57 57 57 52 52 52 54 54 57 50 59 52 52 52 38 38 27 36 42 32 28 18 20 20 32 32 37 43 44 44 44 35 42 42 44 44 44 40 40 36 36 28 24 24 31 32 46 44 44 35 35 32 26 26 16 21 26 30 36 36 27 38 28 28 28 28 18 25 24 20 20 20 28 32 44 46 48 43 46 43 43 33 42 37 32 32 39 29 37 28 37 32 32 28 26 15 13 14 13 25 23 33 24 28 22 18 17 12 11 11 9 8 8 8 8 13 11 17 17 17 19 21 21 9 8 8 8 8 10 11 13 8 8 8 10 10 26 34 34 30 23 23 19 16 19 12 16 15 19 10 8 8 10 10 10 10 10 13 16 12 10 9 9 10 13 10 9 9 9 10 10 16 15 15 10 10 10 13 10 10 10 9 8 8 8 8 8 8 8 8 8 10 11 12 12 10 8 8 6 6 6 6 8 8 10 11 8 8 6 6 8 8 8 16 14 10 9 8 8 6 6 8 6 8 8 8 8 8 8 9 12 12 14 13 15 8 8 8 8 8 8 12 9 9 9 10 11 11 8 8 7 6 8 8 11 11 11 11 9 10 10 11 11 10 11 10 15 15 12 12 11 11 12 10 11 12 10 12 12 10 10 10 9 10 9 8 8 8 8 8 8 8 9 9 10 11 12 15 10 10 9 9 8 10 10 9 9 8 8 8 8 8 8 13 11 10 10 8 8 8 10 10 11 11 12 10 10 10 10 15 13 16 15 15 11 8 8 6 6 8 8 9 9 9 12 10 9 9 11 8 14 8 8 8 8 8 6 6 6 10 10 10 10 13 15 10 9 8 8 8 8 8 8 8 8 9 10 10 10 10 17 11 13 14 12 8 10 8 8 8 10 10 8 6 6 8 7 10 10 8 8 8 10 15 19 21 9 9 8 8 8 8 8 8 8 8 13 15 8 6 6 7 8 6 8 8 8 8 8 10 11 12 25 29 14 15 10 11 9 9 10 9 9 8 8 8 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no459_b05.b1 MSMg01no459_b05.b1 CHROMAT_FILE:
MSMg01no459_b05.b1 PHD_FILE: MSMg01no459_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:51 2005
         (391 letters)



>mm_chr3_15221815_15222609
          Length = 795

 Score =  696 bits (360), Expect = 0.0
 Identities = 383/394 (97%), Gaps = 8/394 (2%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccagttttatgttcaggaaagatgcagtttaagtggtgtttttataaagcaaga 63
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ggaattccaggcttatgttcaggaaagatgcagtttaagtggtgtttttataaagcaaga 536

                                                                       
Query: 64  aaacagccatatgcaacagattctatggaagaacatttgagactccaacaagtctaaact 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aaacagccatatgcaacagattctatggaagaacatttgagactccaacaagtctaaact 476

                                                                       
Query: 124 cagttagtgggcagtagattgtgaaactggtacaaatcagatagtcctcaggaaaaaaga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cagttagtgggcagtagattgtgaaactggtacaaatcagatagtcctcaggaaaaaaga 416

                                                                       
Query: 184 tagaagcatcaaacctttctctgggagtgagaaatgttagattatctacatacatcaagt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tagaagcatcaaacctttctctgggagtgagaaatgttagattatctacatacatcaagt 356

                                                                       
Query: 244 agcccttacctgtccttatctacaagcatctctcctcaccagccctcactcttgaagtca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agcccttacctgtccttatctacaagcatctctcctcaccagccctcactcttgaagtca 296

                                                                       
Query: 304 aggttggaaaacttcctggtgtccagggcaatattttagccacaactggcaaactttcct 363
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aggttggaaaacttcctggtgcccagggcaatattttagccacaactggcaaactttcct 236

                                             
Query: 364 gctg-----c-gccactatcgtagagaatggtgt 391
           ||||     | |  ||||||||||||||||||||
Sbjct: 235 gctgtggtactg--actatcgtagagaatggtgt 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 795
Length adjustment: 9
Effective length of query: 382
Effective length of database: 786
Effective search space:   300252
Effective search space used:   300252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information