Query= MSMg01no459_f18.b1 MSMg01no459_f18.b1 CHROMAT_FILE:
MSMg01no459_f18.b1 PHD_FILE: MSMg01no459_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:15 2005
(435 letters)
>mm_chr3_83411358_83412189
Length = 832
Score = 706 bits (365), Expect = 0.0
Identities = 397/411 (96%), Gaps = 7/411 (1%)
Strand = Plus / Minus
Query: 25 tttaaaaatggagagcctcctttacaaaagatggttcattgtaaaaatggccgctgtaca 84
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tttaaaaatgcagagcctcctttacaaaagatggttcattgtaaaaatggccgctgtaca 773
Query: 85 gagtttgttctgttcttagagtcagcccagcagaccttgagaaagggcattacatagaat 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 772 gagtttgttctgttcttagagtcagcccagcagaccttgagaaagggcattacatggaat 713
Query: 145 acaagcaaaggcttattgtttttcacccatccattgaattccaaacatagaagaataaac 204
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 712 aaaagcaaaggcttattgtttttcacccattcattgaattccaaacatagaagaataa-- 655
Query: 205 acacacacacacacacacacacaccaatctgagggtggcaaaaataaagctgagagggaa 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 --acacacacacacacacacacaccaatctgagggtggcaaaaataaagctgagagggaa 597
Query: 265 ttgagagacacaatgacagcctcattgaggaatctttgaaaaagattagtgtggtggttg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttgagagacacaatgacagcctcattgaggaatctttgaaaaagattagtgtggtggttg 537
Query: 325 ttgtctttctttttttttttcaggatttgtttaaatctattgtgttaaaaaaatatgact 384
||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 536 ttgtctttc---ttttttttcaggatttgtttaaatctattgtgttaaaaaaatagggct 480
Query: 385 tacaattccttgctgaagtgaagactcaggcaacacttttacatttaaccg 435
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cacaattccttgctgaagtgaagactcaggcaacacttttacatttaaccg 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 832
Length adjustment: 9
Effective length of query: 426
Effective length of database: 823
Effective search space: 350598
Effective search space used: 350598
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_f18.g1 MSMg01no459_f18.g1 CHROMAT_FILE:
MSMg01no459_f18.g1 PHD_FILE: MSMg01no459_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:15 2005
(405 letters)
>mm_chr3_83240344_83241148
Length = 805
Score = 768 bits (397), Expect = 0.0
Identities = 403/405 (99%)
Strand = Plus / Plus
Query: 1 catccttggacaagggctgaccttgagtagagcaaaagagaggcagtgaagccagcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catccttggacaagggctgaccttgagtagagcaaaagagaggcagtgaagccagcagag 260
Query: 61 ctttaggcgatcttatgggctcaggacacataagttatagtggagatgccaaaacatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttaggcgatcttatgggctcaggacacataagttatagtggagatgccaaaacatcta 320
Query: 121 ggacttcagagaccaagatcttggagataggaaatccaaataaataagcccagcatttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggacttcagagaccaagatcttggagataggaaatccaaataaataagcccagcatttag 380
Query: 181 tggttttcccctcagaggaatttcccaaatattaatatgttcagacaaggactctgtaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggttttcccctcagaggaatttcccaaatattaatatgttcagacaaggactctgtaac 440
Query: 241 caagtatctttttaaaaacagagcagtatttctagaagtctccgaagggaggggtgggac 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagtaactttttaaaaacagagcagtatttctagaagtctccgaagggaggggtgggac 500
Query: 301 tgactgaaggcttaaagattcagaaaccttaaagaacaggatctgagaaatatccccggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgactgaaggcttaaagattcagaaaccttaaagaacaggatctgagaaatatccccggt 560
Query: 361 tctctgtaagacttctaaaaaggtacagtgtgggacggaatcaac 405
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 tctctgtaagacttctaaaaaggtacaatgtgggacggaatcaac 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
