Query= MSMg01no459_p24.b1 MSMg01no459_p24.b1 CHROMAT_FILE:
MSMg01no459_p24.b1 PHD_FILE: MSMg01no459_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:07 2005
(435 letters)
>mm_chr3_13072127_13072961
Length = 835
Score = 748 bits (387), Expect = 0.0
Identities = 420/431 (97%)
Strand = Plus / Plus
Query: 5 gaattctccaactttgcctagccagacagtacaatagcaatcactgcttagacatcaagc 64
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattatccaactttgtctagccagacagtacaatagcaatcactgcttagacatcaagc 264
Query: 65 ataaatttctaaatcccaataaaattaaaacatccttttgtattaaccacatattaaatt 124
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 ataaatttccaaatcccaataaaattaaagcatccttttgtattaaccacatattaaatt 324
Query: 125 ataatatttataagaagtacatatcataatatattttagtacaaaaatttgaaatttaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataatatttataagaagtacatatcataatatattttagtacaaaaatttgaaatttaag 384
Query: 185 ctctcatataaaaaacaagatacaatttgtacacatgatccactttttttctatcatcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctctcatataaaaaacaagatacaatttgtacacatgatccactttttttctatcatcat 444
Query: 245 tttctaaatggtttcatttaatatcaatttgttattttaaaatgctataaaatcttacag 304
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 tttctgaatggtttcatttaatatcaatttgttattttaaaatgccataaaatcttacag 504
Query: 305 tcccatcattaaaactatagctcataggtcacatttggtaggaaaatggaagatcagatc 364
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 tcccatcattaaaactatagctcataggtgacatttggtaggaaaatggaagatcagatc 564
Query: 365 ctagcctttacctttatcttcttatctaaatttgcatgtctttccttcaaaattatggag 424
|||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 ctagactttacccttatcttcttatctaaattcacatgtctttccttcaaaattatggag 624
Query: 425 aataaaaaggt 435
|||||||||||
Sbjct: 625 aataaaaaggt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_p24.g1 MSMg01no459_p24.g1 CHROMAT_FILE:
MSMg01no459_p24.g1 PHD_FILE: MSMg01no459_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:07 2005
(356 letters)
>mm_chr3_13218019_13218774
Length = 756
Score = 563 bits (291), Expect = e-165
Identities = 309/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 2 atttatgtctcaagctgacctaagttgtgttcaaaggaaatcctttaaaacatgtagaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atttatgtctcaagctgacctaagttgtgttcaaaggaaatcctttaaaacatgtagaaa 311
Query: 62 aattctttattttaagttttatattgcataatctaataatacaaattatatacataagtt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aattctttattttaagttttatattgcataatctaataatacaaattatatacataagtt 251
Query: 122 ttataatatgaagaactttctgtgtgtgccacaaattattataaatgcctccaatttttg 181
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 250 ttataatatgaagaactttctgtgtgtgccacaaattattataaatgcccccaattttcg 191
Query: 182 tttaaaaaagaaaatataaattaaaaatataatatttattttgacattttggtgaagctg 241
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 190 tttaaaaaagaaaatataaattaaaaatataatatttattttgactttttggtgaagctg 131
Query: 242 ttatgttattctgccccatttggtaagtaatgagctatcaattataatttctaagttgtt 301
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 130 ttatgttattctgccccatttggtaagtaatgatct-ccaattataatttctaagttgtt 72
Query: 302 gatatatatatatat 316
|||||||||||||||
Sbjct: 71 gatatatatatatat 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
