Query= MSMg01no461_d06.b1 MSMg01no461_d06.b1 CHROMAT_FILE:
MSMg01no461_d06.b1 PHD_FILE: MSMg01no461_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:43 2005
(202 letters)
>mm_chr3_30118418_30119019
Length = 602
Score = 375 bits (194), Expect = e-109
Identities = 197/198 (99%)
Strand = Plus / Plus
Query: 1 ctgcgttccacagaaacgcctggctagatgttatcttcgaaatgcctccactttttcatt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 ctgcgttccacagaaacgcctggctagatgttatcttcgaaatgccgccactttttcatt 260
Query: 61 tttcaaaatcgcaggatgatttctcattgtgtgacagtctccggtgactcgtgagacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcaaaatcgcaggatgatttctcattgtgtgacagtctccggtgactcgtgagacaaa 320
Query: 121 acgtgctgtcaactgagttcccctatcaccgttagtttccaaaagcttggcctggcagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgtgctgtcaactgagttcccctatcaccgttagtttccaaaagcttggcctggcagtg 380
Query: 181 gtagattggggggggggg 198
||||||||||||||||||
Sbjct: 381 gtagattggggggggggg 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 602
Length adjustment: 8
Effective length of query: 194
Effective length of database: 594
Effective search space: 115236
Effective search space used: 115236
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_d06.g1 MSMg01no461_d06.g1 CHROMAT_FILE:
MSMg01no461_d06.g1 PHD_FILE: MSMg01no461_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:43 2005
(240 letters)
>mm_chr3_30329754_30330395
Length = 642
Score = 402 bits (208), Expect = e-117
Identities = 233/242 (96%), Gaps = 2/242 (0%)
Strand = Plus / Minus
Query: 1 taagacataggctttccatcctgtgacactggataaaaccagttcatttgaagcaacagg 60
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 442 taagacacaggctttccatcctgtgacactggataaaaccaggccatttgaagcaacagg 383
Query: 61 agaaatggaagtgtaagcttctgtagacttatatggtaagagtcccactgtatcatgac- 119
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 382 agaaatggaagtgtaagcttctgtagacttagatggtaagagtcccactgtatcatgaca 323
Query: 120 -agagagagacaagtgtgcttgcatagttatctggtgaaggttgtgcctaaactgggcat 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gagagagagacaagtgtgcttgcatagttatctggtgaaggttgtgcctaaactgggcat 263
Query: 179 cagaggattcggtgaacaatggagcaggggcaatgggcacccagtggggagaagaagcat 238
|||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 262 cagaggattcagtgagcaatggagcaggggcaatgggcacccagtggggagaggaagcat 203
Query: 239 tc 240
||
Sbjct: 202 tc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 642
Length adjustment: 9
Effective length of query: 231
Effective length of database: 633
Effective search space: 146223
Effective search space used: 146223
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
