Query= MSMg01no461_e13.b1 MSMg01no461_e13.b1 CHROMAT_FILE:
MSMg01no461_e13.b1 PHD_FILE: MSMg01no461_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:50 2005
(481 letters)
>mm_chr3_72106018_72106898
Length = 881
Score = 509 bits (263), Expect = e-148
Identities = 293/310 (94%), Gaps = 11/310 (3%)
Strand = Plus / Minus
Query: 1 gtgcatgtctttgcaactgctgaaagtccatgggtgtaagtacactgacatgcccagaan 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtgcatgtctttgcaactgctgaaagtccatgggtgtaagtacactgacatgcccagaaa 251
Query: 61 acagttccttgtagcttttgcctgcctctggttcatggactttcttta-----------g 109
|||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 250 acagttccttgtagcttttgcctgcctctggttcatggactttctttagagtgatctatg 191
Query: 110 atccttaagaggaaggtatgtgatagttgtcccatcaatggataccttgatgtggatacc 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atccttaagaggaaggtatgtgatagttgtcccatcaatggataccttgatgtggatacc 131
Query: 170 ttgttgtaggtacctggttgtattttcttcatttacatttcaaatgctatcccaaaagtc 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttgttgtaggtacctggttgtattttcttcatttacatttcaaatgctatcccaaaagtc 71
Query: 230 ccctataccctttttcctccatgctccccaacgcacccactcctgcttcctggtcctggc 289
|||||||| ||| | ||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 70 ccctatactcttctccctccatgctccccaacccacccactcctgcttcctggccctggc 11
Query: 290 acttccctgt 299
||||||||||
Sbjct: 10 acttccctgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_e13.g1 MSMg01no461_e13.g1 CHROMAT_FILE:
MSMg01no461_e13.g1 PHD_FILE: MSMg01no461_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:50 2005
(467 letters)
>mm_chr3_71865171_71866037
Length = 867
Score = 851 bits (440), Expect = 0.0
Identities = 462/473 (97%), Gaps = 6/473 (1%)
Strand = Plus / Plus
Query: 1 ttaaggcataattccatatgtcagtgacactgtgtatttcttctatgaaggaacaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttaaggcataattccatatgtcagtgacactgtgtatttcttctatgaaggaacaaaaaa 254
Query: 61 aaa------tgcgttgttggcatctgaaaacttgccacaaattctgtccagattgatact 114
||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 255 aaaaaaaaatgcgttgttggcatctgaaaacttgccgcaaattctgtccagattgatact 314
Query: 115 tcttcttcctttatcctttagtctctttatccttttctatttctgtttctctagtaaata 174
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcttcttcctttatcccttagtctctttatccttttctatttctgtttctctagtaaata 374
Query: 175 gatatgtttttgttgttatctttattttggnttgtttagttttagataaatatgaggaca 234
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 375 gatatgtttttgttgttatctttattttggtttgtttagttttagataaatatgaggaca 434
Query: 235 ctcttaaagttctgtatagttgtggtcatgtgccctgtgagtctgtaagacagaatcatg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ctcttaaagttctgtatagttgtggtcatgtgccctgtgagtctgtaagacagaatcatg 494
Query: 295 tagccgtgaatatgatttggttcatcatttttcttttaagataccacttcaatttgacat 354
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tagccgttaatatgatttggttcatcatttttcttttaagataccacttcaatttgacat 554
Query: 355 tgtgttctaattaatctgtgaaaaaccagttattttctctttaacatattttgcatcctt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgtgttctaattaatctgtgaaaaaccagttattttctctttaacatattttgcatcctt 614
Query: 415 actttccattgtgagactactcctttgattcttcctcatcagcactactcttt 467
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 actttccattgcgagactactcctttgattcttcctcatcagcactactcttt 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
