Query= MSMg01no461_j15.b1 MSMg01no461_j15.b1 CHROMAT_FILE:
MSMg01no461_j15.b1 PHD_FILE: MSMg01no461_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:16 2005
(438 letters)
>mm_chr3_157307761_157308596
Length = 836
Score = 717 bits (371), Expect = 0.0
Identities = 421/439 (95%), Gaps = 4/439 (0%)
Strand = Plus / Plus
Query: 1 tccacctataactaaatgatgccttttgtgaatcagctgtcgactcccgctgctttattt 60
|||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||
Sbjct: 201 tccacctataactaaatgatgccttttgtgaatcagctattgactcccactgctttattt 260
Query: 61 caaatttgtttccttctcagatttaagttcagtgactattactgagcacaggttaaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 taaatttgtttccttctcagatttaagttcagtgactattactgagcacagggtaaagac 320
Query: 121 tatcatcagaggaatgtccatctctcacctccatgggtatcgaactgtcatctgctattt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tatcatcagaggaatgtccatctctcacctccatcaatatcgaactgtcatctgctattt 380
Query: 181 catcatcacaagagagggccctgaacagttctccacaagtctcaacactaagatgtgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcatcacaagagagggccctgaacagttctccacaagtctcaacactaagatgtgctg 440
Query: 241 caatgacatctctctttttataggaccaggtgatggagcctttgatgcaaagttggactt 300
|||||||||| | ||| |||||||||||||||||||||||||||||||||||| | ||
Sbjct: 441 caatgacatcccactt---ataggaccaggtgatggagcctttgatgcaaagttgaattt 497
Query: 301 gactctcaatccaccatacataggccctgtccccttgagaaagcttctgcatgtcccact 360
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gactctcaatacaacatacataggccctgtccccttgagaaagcttctgcatgtcccact 557
Query: 361 gggtctcaaatgaagccatctatgacctgaaa-tagtgtttcccataaggttattgtcaa 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 558 gggtctcaaatgaagccatctatgacctgaaaatagtgtttcccataaggttattgtcaa 617
Query: 420 aatatctaggaagtgtatg 438
|||||||||||||||||||
Sbjct: 618 aatatctaggaagtgtatg 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 836
Length adjustment: 9
Effective length of query: 429
Effective length of database: 827
Effective search space: 354783
Effective search space used: 354783
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_j15.g1 MSMg01no461_j15.g1 CHROMAT_FILE:
MSMg01no461_j15.g1 PHD_FILE: MSMg01no461_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:16 2005
(387 letters)
>mm_chr3_157459384_157460170
Length = 787
Score = 708 bits (366), Expect = 0.0
Identities = 378/382 (98%)
Strand = Plus / Minus
Query: 5 tggctggcattgtatgtgaacctttacctggaaaggcaacaatgcagaatctttattagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tggctggcattgtatgtgaacctttacctggaaaggcaacaatgcagaatctttattagg 328
Query: 65 aaactgtaggagattggatttttatagcctaaaacttaaacatctttttttggttgttgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaactgtaggagattggatttttatagcctaaaacttaaacatctttttttggttgttgt 268
Query: 125 tattgttgttcaacactatattttctaagcaccaatatattaggtaccatctgaaatgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tattgttgttcaacactatattttctaagcaccaatatattaggtaccatctgaaatgtg 208
Query: 185 tagcaagtctgcaattccagttctagggagttgagacaggagggttgcaagtttgaattt 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tagcaagtctgcaattccagttctagggagttgagacaggagggttgcaagtttgaaggg 148
Query: 245 tgtgtgggctacagaggatccacatggctacttagaatttatggaaatgctgtatctttc 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 147 tgtgtgggctacagaggatccacatggctacttaaaatttatggaaatgctgtatctttc 88
Query: 305 accctcatctttaacttgatttattaactattatatatgtaatatatgtataacatatgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 accctcatctttaacttgatttattaactattatatatgtaatatatgtataacatatgt 28
Query: 365 atactacactcacactcacaca 386
||||||||||||||||||||||
Sbjct: 27 atactacactcacactcacaca 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
