Query= MSMg01no466_e19.b1 MSMg01no466_e19.b1 CHROMAT_FILE:
MSMg01no466_e19.b1 PHD_FILE: MSMg01no466_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:44 2005
(450 letters)
>mm_chr3_7019006_7019855
Length = 850
Score = 750 bits (388), Expect = 0.0
Identities = 428/456 (93%), Gaps = 24/456 (5%)
Strand = Plus / Minus
Query: 1 gtcttctgctcttaatttccattgtggaaatcagtctaataatctagattgttttatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gtcttctgctcttaatttccattgtggaaatcagtctaataatctagattgttttatttc 397
Query: 61 ttgggaagcaaagaataaggaacagtttccagtttgagtttgtttttctgttttattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 396 ttgggaagcaaagaataaggaacagtttccagtttgagtttgtttttctgtttcattttt 337
Query: 121 ataacaaagaagcagcttcctaatgactgccatgtaaacttgaggttacaacctgaaagc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 336 ataacaaagaagcagcttcctaatgactgccatgtaaacttgaggttacaacctgagagc 277
Query: 181 ctgagaattacagcttagcaaggagggacgttgggttctggtaaaggagagggcagtgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctgagaattacagcttagcaaggagggacgttgggttctggtaaaggagagggcagtgtc 217
Query: 241 acactgagagttggc---------------------tg---actgggaagaaagattgca 276
||||||||||||||| || |||||||||||||||||||
Sbjct: 216 acactgagagttggcttgtcacagatagaaaagagatggctactgggaagaaagattgca 157
Query: 277 cactgtgtctcagaagccatctcacattctccacttttccactctgaactccatttttct 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 cactgtgtctcagaagccatctcacattctccacttttccactctgaactccatttttct 97
Query: 337 gagtgtttagaacagactcctatgagtgaatctttcatgagtagtttcaaaattttagtt 396
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 96 gagtgtttagaacagactcctgtgagtgaatctttcatgagtagtttcaaaatcttagtt 37
Query: 397 cttcagcttgtattccacctgatttctatagcagat 432
||||||||||||||||||||||||||||||||||||
Sbjct: 36 cttcagcttgtattccacctgatttctatagcagat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_e19.g1 MSMg01no466_e19.g1 CHROMAT_FILE:
MSMg01no466_e19.g1 PHD_FILE: MSMg01no466_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:44 2005
(339 letters)
>mm_chr3_6802551_6803289
Length = 739
Score = 588 bits (304), Expect = e-172
Identities = 331/340 (97%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 tctgggttgtattacttcttcatttgctatatcagatacaaacttagtatacaaatttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgggttgtattacttcttcatttgctatatcagatacaaacttagtatacaaatttag 260
Query: 61 tgttaacatttatgtaattttgggtcatatatggtattgaaaagtcaggttggttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttaacatttatgtaattttgggtcatatatggtattgaaaagtcaggttggttttttt 320
Query: 121 t-acaagttttatttattaagatttaatatttatgccatatttataaattctctcctaga 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacaagttttatttattaagatttaatatttatgccatatttataaattctctcctaga 380
Query: 180 gaatgatactattcagtacatcaggaatattctttggaatgaatttttactattagtttt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 gaatgatactattcagtacatcaggaatattctttggaatgaatttttactattagaatt 440
Query: 240 ttttttataaagcctcacaattaataaaagaactagcttagcttatcctcttttacactt 299
| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 441 taggttataaagcctcacaattaaaaaaataactagcttagcttatcctcttttacactt 500
Query: 300 ccatattttcactgtttatctagttaaaatacattcctta 339
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 ccatattttcactgtttatctagttaaaa-acattcctta 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
