Query= MSMg01no466_p10.b1 MSMg01no466_p10.b1 CHROMAT_FILE:
MSMg01no466_p10.b1 PHD_FILE: MSMg01no466_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:40 2005
(360 letters)
>mm_chr3_97919463_97920222
Length = 760
Score = 619 bits (320), Expect = 0.0
Identities = 350/360 (97%)
Strand = Plus / Minus
Query: 1 attaaaaatgattccactaaaaaaaggatcaaggtatgttttaaaacacattagtttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attaaaaatgattccactaaaaaaaggatcaaggtatgttttaaaacacattagtttttg 501
Query: 61 agaaggtgaatcgcagactcaatgctccagttcttaggattggtggcaagtgcttttact 120
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 agaaggtgaattgcagactcaatgctccagttcttaggattggtggcaaatgcttttact 441
Query: 121 tactgaggaagtttacaggatattgagttgtttctaaagtcaagttacaacatagtcaac 180
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 440 tactgaggaagtttacaggatattgagttgtttctaaagtcaagtgacaacaaagtcaac 381
Query: 181 tttaacagtcatcttaaaactttgtatatagaaagaaaaacacattaccatgaattttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttaacagtcatcttaaaactttgtatatagaaagaaaaacacattaccatgaattttct 321
Query: 241 tttttattttatgttacaatgtcaaaaggatagatgccactggaccaagtaggcatctgg 300
| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 320 caataattttatgttacaatgtcaaaaggatagatgcctctggaccaagtaggcatctgg 261
Query: 301 ttctaaatatcatacataactttaaaaccccaaagagtaaaacacagggctgggggtgga 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttctaaatatcatacataaatttaaaaccccaaagagtaaaacacagggctgggggtgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_p10.g1 MSMg01no466_p10.g1 CHROMAT_FILE:
MSMg01no466_p10.g1 PHD_FILE: MSMg01no466_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:40 2005
(421 letters)
>mm_chr3_97743005_97743823
Length = 819
Score = 667 bits (345), Expect = 0.0
Identities = 417/481 (86%), Gaps = 62/481 (12%)
Strand = Plus / Plus
Query: 1 ttttggtgcctttgtcaaaattcaattgagcataactgttagggcttgtgtttctgtccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ttttggtgcctttgtcaaaattcaattgagcataactgttagggcttgtgtttctgtccc 200
Query: 61 gctgatctgagtgtgtttacgctgaataggtcttgactgctgtagcctggcagtaaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctgatctgagtgtgtttacgctgaataggtcttgactgctgtagcctggcagtaaggtt 260
Query: 121 tcagattgggaagcccgagtcaaccagcttaacactgctgctaacactgctgctaacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagattgggaagcccgagtcaaccagcttaacactgctgctaacactgctgctaacact 320
Query: 181 gctgctaa---------------------------------------------------- 188
||||||||
Sbjct: 321 gctgctaatactgctactaacactgctgctgacactgctgctaacactgctgctaacact 380
Query: 189 --------cagagtctcctgcacttcccccatgaatcttagcatcagcaccagtcacagg 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 gctgctaacagagtctcctgcacttcccccatgaatcttagcattagcaccagtcacagg 440
Query: 241 gagactctagaattcaccagaaaacgctgattctaataaggaaagtgcccacctcatacc 300
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gagactctagaattcaccagaaaac--tgattctaataaggaaagtgcccacctcatacc 498
Query: 301 tagagtaaaattagaaaaggaaaattgagcaggtaggctttggagttgaaggaacgacag 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tagcgtaaaattagaaaaggaaaattgagcaggtaggctttggagttgaaggaacgacag 558
Query: 361 gccctttcaaagagctcccactgatagaggctgggaataaaagagccagaaagtttagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gccctttcaaagagctcccactgatagaggctgggaataaaagagccagaaagtttagca 618
Query: 421 a 421
|
Sbjct: 619 a 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 819
Length adjustment: 9
Effective length of query: 412
Effective length of database: 810
Effective search space: 333720
Effective search space used: 333720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
