CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGACCGCGNGA
ATCTTTGTTCTTCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTC
TGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTA
TCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTT
TGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTA
GGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTG
TTCAGGAATTTTTACCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTT
CTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCC
ACTTAGATTTGACCTTAGTACAAGGAGAGAGGAGTGGGTTGACTCACATT
CTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCT
GTCTTTCTTCCCCTGAATGGGTTTAGCTCCCTTGTCGAAGATCAAGCGAC
CATGGGTGTGTGGGTTCATTTCTGCGTCTTTCCATTTATTCCTCTGGGCC
ACCTGTCTGGTCTCTTACCCGTATCAAGGCGTTTTTACCCACTTTCCCTT
GTTCAAAGGTTACTTCCCCCCTTCTCTTCCCCCCATTTTCCCTTTTTCCC
CTTAATCACTTTTTTTTTCTTCCCTTTTTTTCTTTTCCAAACATATTTCC
TTTCTCCCCCCCTTTTTCCCACATTTACCCCCCCACTTTCTTCTTTTCTC
TTN

GTAATGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCTGACATGTTTTTTCCTTGACCCTCTGTGCC
TTGAACTGAAGGTAAATCACACTTTTACAATCTTGATTCTACACAGGATA
CTAGGGGGCTCAAAATGTGGTAGGAATCCCATGAGTTTACTCCCCCTGCA
TCACTGTATTGACAAAATATTCACCGGTGTGAGGACAGTATAGATGTGTG
CACAGATTCTGTTAATGAGCAGCATAGTATCTTCTATCTCACTGTGACAA
TATGCACATGTGATCCCTGTTCACAATCTACACACTGTATTTACCTCACA
GAATTGGTGATTATTGTGTTTGCCACTTCTTTTACTCTCAATGTGCTAAC
ATTTAGACTGACTCGGTTTGTTTAACTCTATAGTTTGCTTTTACAAATGC
TCAAAATCTTGAAAACCTTAGTGCATATCTCTAATACATTGCAATTTTCT
GTTGTCCAAGTGAGGGCATGATCATACTTATCTACATAAGTAGAAACTCT
AAAGGTAAGTTCTAGAGCTAAATGTTTATATATATATAAATATATATATA
TATTTATATATATATTTATATATATAAATGTTTATATATATATATCAAAA
TTGCATTATAGAAGTACATGCAAATTTCTCAGAAAGGAAAACCCCATAGA
GCCTAAGTGATAGTATATGCCTTGATACCTGATGGTTAGGGCTGTATTTT
TATTGTACCTTCAAAACCTTAATTATTG

Query= MSMg01no469_j24.g1 MSMg01no469_j24.g1 CHROMAT_FILE:
MSMg01no469_j24.g1 PHD_FILE: MSMg01no469_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:16 2005
         (579 letters)



>mm_chr3_11578781_11579759
          Length = 979

 Score = 1017 bits (526), Expect = 0.0
 Identities = 541/546 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgacatgttttttccttgaccctctgtgccttgaactgaaggtaaatcacacttttac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgacatgttttttccttgaccctctgtgccttgaactgaaggtaaatcacacttttac 260

                                                                       
Query: 61  aatcttgattctacacaggatactagggggctcaaaatgtggtaggaatcccatgagttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcttgattctacacaggatactagggggctcaaaatgtggtaggaatcccatgagttt 320

                                                                       
Query: 121 actccccctgcatcactgtattgacaaaatattcaccggtgtgaggacagtatagatgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actccccctgcatcactgtattgacaaaatattcaccggtgtgaggacagtatagatgtg 380

                                                                       
Query: 181 tgcacagattctgttaatgagcagcatagtatcttctatctcactgtgacaatatgcaca 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcacagattctgttagtgagcagcatagtatcttctatctcactgtgacaatatgcaca 440

                                                                       
Query: 241 tgtgatccctgttcacaatctacacactgtatttacctcacagaattggtgattattgtg 300
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgatccctgcacacaatctacacactgtatttacctcacagaattggtgattattgtg 500

                                                                       
Query: 301 tttgccacttcttttactctcaatgtgctaacatttagactgactcggtttgtttaactc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgccacttcttttactctcaatgtgctaacatttagactgactcggtttgtttaactc 560

                                                                       
Query: 361 tatagtttgcttttacaaatgctcaaaatcttgaaaaccttagtgcatatctctaataca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatagtttgcttttacaaatgctcaaaatcttgaaaaccttagtgcatatctctaataca 620

                                                                       
Query: 421 ttgcaattttctgttgtccaagtgagggcatgatcatacttatctacataagtagaaact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgcaattttctgttgtccaagtgagggcatgatcatacttatctacataagtagaaact 680

                                                                       
Query: 481 ctaaaggtaagttctagagctaaatgtttatatatatataaatatatatatatatttata 540
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 681 ctaaaggtaagttctagagctaaatgtttatatatatatatatatatatatatatatata 740

                 
Query: 541 tatata 546
           ||||||
Sbjct: 741 tatata 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)