NNNNGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCACATTTCTTGACACACACTTGCTCTTCTCTGCATTGG
ACCAGTCATCTTCACCGCATGGATCACATTCCCTCTGTCCTATTTGTAAA
AAAACAAACAAACAAACAAACAAAAAACATAGAATTGACTTCAATGGAAC
CCAGTTGTCACTTTTAACTGTGAACAGTCTAGGAAAGTTAAAGACCTGGA
CAATGTTCACTGGAAATCTGTTATAAAATAGATATAATATCTCATATTTA
ATAGTGGGAAATTATTCTTATTTTCTATAGATGCAGTGATAGATTGAGGG
TTGTTTTCACCTTCAGTACTTGACCATTTCCTCTCAACCCACACTTTTTT
GAACTGGTTGTTTCTACTGAAGAGCTCCTTTCTTTCTCCTACAACTGTCT
ATTGAAGGACAATATCTGTGTCTTTAATCAATTCCAGAACAGCCCAGGAA
TGAGGAAGTCACAGCTTCTGATGTGAAACAATGAAAATGAATGGTACACA
GTTTGTCAAACCCTTTGTGTTTTCAGTCTTTCATTCAATATTCCTTCCTG
GAGGAGAATCACGCAAGTGCCCACTCAAATAGCCCCAACTCTGGATGCTC
ATTTCAAGGAGTGATTAGGATAATGATGGGAAGGAAAACAAAACCTCCAG
GCATGTGCCCAGAGGCTAAGATGN

CAAGGGATATAGGCACACCCTGCGTGTTTCGGAGTTGCATATTTATATAT
GTTCTACAAGGAGTAGTCACCAGTGCGACGGCGTGTGGTATCGACCGGTG
CAGGCTACCCGCGAGCAGAGGCGTGTGTCGCCGTGTGCTCGACCGTTTAG
ATACAGACAGTTACAACACGCCGATACCACTTTCTCCTCTTATCTCTTAT
GTAACTTGTTCGAGAGAATATATCCTACGGCACCGTAAATACTATGATAC
ACTCTACGCCATCACGTCATTTACTCCTCCAGTATAGGAGGGAGATAGGA
GGATNAATCATAAGGTTTGATCGGGCGATAAAGTCTCGTGTTGCGGGGGC
CTACCCGCTTCCCCGCGTTTATTACGCGCGGCGCAGCGTTATGTTGAGTC
GGGACTCAGCAAAGCGCGCTAATTGTTATCTGATGCCCTGCAGCGCCGGC
GCGGTACGCGTACTCATATTCCCCCGCCGTCCACCCACACCTACGTCACC
TCTATCGTTATGGACGAGGCGGGAGGCCGGTATTACGCCCATTGCGTCTA
TCGCCGTCGTTCGTGGTTGCGTCGCATTCATCATGTCGCGAGCCGCAGTC
CTGCGGCGCCTATCAACATATGTTCATCACGAGCCTCTCATCACCTCTAT
TCTTTCCGGTTATATCCGGTCGCGCGCGGCGCATCATAAGTTATATACTC
CTATTCGTTTCGCGCGCCCGCGTTCGCGTCGTTCTATTCTAGTCTACTGC
CGCCTACTATGACCCGTCCGCCCCTAGCCATAATAATTCGGTAGCAGAAC
GCCGAGTATGGAGAATATGGTTGAGGAAGAGAGTATAAATACGCCAAGGT
TGCGCTAAGCTGTGAATGACGAATATGTGGTCTCGCCGCGCGTGTGCAGC
ACGGGCACGCGCGTCGCGTGTAATATACTTACAATATGCGCGGTCGCAAT
AGATAATCGCGTATAGTACACAGAGACGACCAAGAAGTAGTTATAAG

Query= MSMg01no471_g11.b1 MSMg01no471_g11.b1 CHROMAT_FILE:
MSMg01no471_g11.b1 PHD_FILE: MSMg01no471_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:38 2005
         (644 letters)



>mm_chr3_63907514_63908557
          Length = 1044

 Score = 1230 bits (636), Expect = 0.0
 Identities = 642/644 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cacacttgctcttctctgcattggaccagtcatcttcaccgcatggatcacattccctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 cacacttgctcttctctgcattggaccagtcatcttcaccgcatggatcacattccctct 888

                                                                       
Query: 61  gtcctatttgtaaaaaaacaaacaaacaaacaaacaaaaaacatagaattgacttcaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 gtcctatttgtaaaaaaacaaacaaacaaacaaacaaaaaacatagaattgacttcaatg 828

                                                                       
Query: 121 gaacccagttgtcacttttaactgtgaacagtctaggaaagttaaagacctggacaatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gaacccagttgtcacttttaactgtgaacagtctaggaaagttaaagacctggacaatgt 768

                                                                       
Query: 181 tcactggaaatctgttataaaatagatataatatctcatatttaatagtgggaaattatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 tcactggaaatctgttataaaatagatataatatctcatatttaatagtgggaaattatt 708

                                                                       
Query: 241 cttattttctatagatgcagtgatagattgagggttgttttcaccttcagtacttgacca 300
           |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 cttagtgtctatagatgcagtgatagattgagggttgttttcaccttcagtacttgacca 648

                                                                       
Query: 301 tttcctctcaacccacacttttttgaactggttgtttctactgaagagctcctttctttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tttcctctcaacccacacttttttgaactggttgtttctactgaagagctcctttctttc 588

                                                                       
Query: 361 tcctacaactgtctattgaaggacaatatctgtgtctttaatcaattccagaacagccca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tcctacaactgtctattgaaggacaatatctgtgtctttaatcaattccagaacagccca 528

                                                                       
Query: 421 ggaatgaggaagtcacagcttctgatgtgaaacaatgaaaatgaatggtacacagtttgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ggaatgaggaagtcacagcttctgatgtgaaacaatgaaaatgaatggtacacagtttgt 468

                                                                       
Query: 481 caaaccctttgtgttttcagtctttcattcaatattccttcctggaggagaatcacgcaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 caaaccctttgtgttttcagtctttcattcaatattccttcctggaggagaatcacgcaa 408

                                                                       
Query: 541 gtgcccactcaaatagccccaactctggatgctcatttcaaggagtgattaggataatga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gtgcccactcaaatagccccaactctggatgctcatttcaaggagtgattaggataatga 348

                                                       
Query: 601 tgggaaggaaaacaaaacctccaggcatgtgcccagaggctaag 644
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tgggaaggaaaacaaaacctccaggcatgtgcccagaggctaag 304


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space:   655556
Effective search space used:   655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)