NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTCTCTTTCATGATGTTTTAGAACTTAATTTTCCAGTCTAAAA
TTTCTTTAATATAATACTAACTTGCCAAATAAGAAATTAAAATCAAATTG
ATACATTTGTACTCTAGTAAGAGCCTCAAAACAACTTTTTTTTTTCCATG
AAGGATGACAGTTGTATGACTGTCCTTTGAGGTGAATGTTCTTTTGTGCT
ACAGGACTTTGACTAATATCAGATGCAGGCAGACAACTCTATGCTCTGCT
TCGTAATTCCCAGGAATTTTTCTCAAGTTTCTTGAGAGAGTTTTCTTCTC
TGTATCAGGAGGAAAATGATCTTATCACAAGTAAAAAGGCCTTCAGGCTC
AGAGAAATCTTTGAGCACAAGCTGCTTTACCAACCCCTAACCAACAGCGC
CCTTCTTACGTAGCCCCCCAGGATTAATGATGACTCCAGTGCAGACACCA
TGGCCTATGCATTTTTATAGAATATATTTTTTTTGTCTAATTCAGCACAC
GGACGACTGATTTTACCTATATATGGATTCTCTCTTTCATTCCAAGGAAT
TCGCATCTAGTAAAGTTACACTAACATTTTTATCCTTTTCTTTGTGAATC
TTACTTGGGGTTATTAAATCCTAAGGCCCCTTGCCTAAACTCCGAGAACA
GGTTTTTCAAATTTCCTTTGTCTTTAATTAATGACTGATAC

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTATGTACCTCATTTTT
AATAGGGTTATTTGGTTTCCTTGGGTTCAAAATTTTTTTAGAGTATAGAA
TAATTTATTTAGGGCATGGGGAGGGGAGTTAAGAGAGTAGAAGAGGCAGA
GAGAATGATAGATAAAGCAGAGAGTAGAGAAGTAGAAGCTGGTCTTTTCT
AAGTGGAGAGAGGGGAAAGGGAATGCGCCCAGACGCTAGGGACAGAAACA
GGAGCCAGATTAGCTCGGTTTCCAACACCGNGAGCCCACGGCAGACAACG
GTTTTTATCCCCCCCCCATATTTAGGATTGGCCAAGATCTTCTCCCACTC
CGCTTCGTGACCGCCTTTTTGTCTGTGGCGCTCTGCTAGCATAACCTCTG
CAACCGCTCGACCACTCTTCCGCCCTCCCCTCGCCCCTCCCATCTCCTCC
TCTCCTGCTCTCCTGGTCCTACCTTCGTCCCCCGGCGCCCTTCCCCCCCC
CATCTTCCCTCTTACTTCCTCCGTCTCTCCTCGTTTGCCCTCCCTGCGTC
GCACCGTGGGGTCATTCTCCCCTTACCCGCCAAACGCCCACCCAATCTCT
TTTTTTTTTTTTCTGCCCCGCCTCGCCATGTTCCCCGATGGTCTCTTCTT
CTTGCTTCCCTCTATCCTTCTTTGCGCCTATCCTCGGCAATCCCCCACTC
TTCG

Query= MSMg01no474_n09.b1 MSMg01no474_n09.b1 CHROMAT_FILE:
MSMg01no474_n09.b1 PHD_FILE: MSMg01no474_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:25 2005
         (514 letters)



>mm_chr3_48491315_48492228
          Length = 914

 Score =  949 bits (491), Expect = 0.0
 Identities = 508/519 (97%), Gaps = 10/519 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttagaacttaattttccagtctaaaatttctttaatataatactaacttgccaaataag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttagaacttaattttccagtctaaaatttctttaatataatactaacttgccaaataag 260

                                                                       
Query: 61  aaattaaaatcaaattgatacatttgtactctagtaagagcctcaaaacaactttttttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattaaaatcaaattgatacatttgtactctagtaagagcctcaaaacaactttttttt 320

                                                                       
Query: 121 ttccatgaaggatgacagttgtatgactgtcctttgaggtgaatgttcttttgtgctaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccatgaaggatgacagttgtatgactgtcctttgaggtgaatgttcttttgtgctaca 380

                                                                       
Query: 181 ggactttgactaatatcagatgcaggcagacaactctatgctctgcttcgtaattcccag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggactttgactaatatcagatgcaggcagacaactctatgctctgcttcgtaattcccag 440

                                                                       
Query: 241 gaattttt-----ctcaagtttcttgagagagttttcttctctgtatcaggaggaaaatg 295
           |||          | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaa-----ggagacacaagtttcttgagagagttttcttctctgtatcaggaggaaaatg 495

                                                                       
Query: 296 atcttatcacaagtaaaaaggccttcaggctcagagaaatctttgagcacaagctgcttt 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atcttatcacaagtaaaaaggccttcaggctcagagaaatctttgagcacaagctgcttt 555

                                                                       
Query: 356 accaacccctaaccaacagcgcccttcttacgtagccccccaggattaatgatgactcca 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 accaacccctaaccaacagcgcccttcttacgtagccccccaggattaatgatgactcca 615

                                                                       
Query: 416 gtgcagacaccatggcctatgcatttttatagaatatattttttttgtctaattcagcac 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtgcagacaccatggcctatgcatttttatagaatatattttttttgtctaattcagcac 675

                                                  
Query: 476 acggacgactgattttacctatatatggattctctcttt 514
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 676 acggacgactgattttacctatatatggattctctcttt 714


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)