NATCATXXXXXXXXXXXXXXXXXXXXXTCCTAATTTCGTACCGGCGCGGA
ATTCTGCACTATTACATCAGATCCTGGACTTTCTTGGTTGGGAGACTTTT
AATGATAGCTTCTATTTCTTCACGGGTTATGGGATGGTTTAGATGGTATA
TCTGATCCTGTATTGAACTTTGCTATTTGGTCTAGAAAGTTGTCCATTTC
ATGCAGATTTTCCAGTTTTGTTGAATATAGACTTTTGTAATAGGATCTGT
TTTTTTTTTAATTTCCTCAGGTTCTGTTGTTATACCTCCATTTTCACTGG
GGACTCAGAGAAACTTTTAATGCTTTGGAAGCCCGCCGGACAGCCGGCCC
CAACGTTTTTTTTTCCCCACCCGTTTTCTCTCCGTTTCTTCCTTCTCTGT
ATCCTTCGTTTCTTTATCCCCCCCCCCCTCTTCTCTATTTCCGTTTCCTT
TTTTTCGATTCTTACTTCCTTGTCTCTCCCTCCCTTTCCCCTCACTACTT
AATCCTTACTCCCCTCTTTCTTTCTTTTCCTTTTTCTTTTCTTGTCTATT
TCTTTTCTTCTTCTCTTTTTCCTTCTTCCTTACATATCTTTCTTCATTTT
TCAAACTACTGTATGATACCTTTCTCTCTCCCTTCCCTCTTTCCCGTCAT
CTTTCGTTTCTTTCTATCCCCTTTATCCTCCTTCTCTTAGCATATCCTCA
GTATACCCACTTTTCCTTTTTCTTTCCTTTAATAATCCTNTGTTTTCTCC
TCTTTTCACTTAATTTATACTATATCGCTCCGCTTATTCTCGTTATTGTT
ATCTCCTCTTATCACTTTATTTTCTACTTTGATCTGTCCCTN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGGTCCTCACAGACTATAAAGTCAC
AAGACCATTCATCTGTTCAAATGGTGTATATCACAGCATTTATTATATTT
GTGGCTGAGGTTTTAATAAATGAAATGGAATGTCCAAGTACTCTAAGTCA
ATATGAAAGTTAAACTAAAGTAATAAGCATGTGAGATTTGATGGAACTGT
CCTGGGAGAGAATCTAAGTTTTAGTTATGGTAGCAACTACAGTTTAATAA
CCAGCAGGCATAGAGAAGGTCTTATTAACACATGGTGAGAGCTTTGACCA
AGATGCCTGTGTCAGATTCAGAAGTAAAAACTGGGAAGAACAATCTGTGT
TTTATTTTCTAGAGACTAAGAAATAAAATGAGCAAGTTGATTTAAAAGGA
AAGAAGTTACGAAGTTAATCTAGCGACTTTGCTTAAAATAATTAATACTA
TTAATAATAACCTATGGCAAGAATTTAAAACCACATTATTGATTTCATGA
CTTGGAGTTCATGATTGTGCTACTGGCATTATTTATTCACTTGTAAGTCA
AGGCATCACAAATTTTGGTACTAAAATGTAGCCAGATTTTAAATTTGGAA
TATATTTTCTTCCTCACCTANAATCTCTCTATGGGGAAAGCTTTTATGTG
AAAGTGGTTGTTTAAAATCCCACCTAAAAAGCTTTAAAAAAAAAATACC

Query= MSMg01no474_n22.g1 MSMg01no474_n22.g1 CHROMAT_FILE:
MSMg01no474_n22.g1 PHD_FILE: MSMg01no474_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:28 2005
         (516 letters)



>mm_chr3_18635296_18636211
          Length = 916

 Score =  928 bits (480), Expect = 0.0
 Identities = 507/516 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggtcctcacagactataaagtcacaagaccattcatctgttcaaatggtgtatatcaca 60
           ||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||
Sbjct: 607 tggtcctcacagactataaagtcacaagatcattcatctgttcaaatgttgtacatcaca 548

                                                                       
Query: 61  gcatttattatatttgtggctgaggttttaataaatgaaatggaatgtccaagtactcta 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 547 gcatttattatatttgtggctgaggttttaatagatgaaatggaatgtccaagtactcta 488

                                                                       
Query: 121 agtcaatatgaaagttaaactaaagtaataagcatgtgagatttgatggaactgtcctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 487 agtcaatatgaaagttaaactaaagtaataagcatgtgagatttggtgggactgtcctgg 428

                                                                       
Query: 181 gagagaatctaagttttagttatggtagcaactacagtttaataaccagcaggcatagag 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gagagactctaagttttagttatggtagcaactacagtttaataaccagcaggcatagag 368

                                                                       
Query: 241 aaggtcttattaacacatggtgagagctttgaccaagatgcctgtgtcagattcagaagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaggtcttattaacacatggtgagagctttgaccaagatgcctgtgtcagattcagaagt 308

                                                                       
Query: 301 aaaaactgggaagaacaatctgtgttttattttctagagactaagaaataaaatgagcaa 360
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaaaactgggaggaacaatctgtgttttattttctagagactaagaaataaaatgagcaa 248

                                                                       
Query: 361 gttgatttaaaaggaaagaagttacgaagttaatctagcgactttgcttaaaataattaa 420
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 247 gttgatttaaaaggaaagaagttacgaagttaatccagcgactttgcttaaaataattaa 188

                                                                       
Query: 421 tactattaataataacctatggcaagaatttaaaaccacattattgatttcatgacttgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tactattaataataacctatggcaagaatttaaaaccacattattgatttcatgacttgg 128

                                               
Query: 481 agttcatgattgtgctactggcattatttattcact 516
           ||||||||||||||||||||||||||||||||||||
Sbjct: 127 agttcatgattgtgctactggcattatttattcact 92


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space:   458436
Effective search space used:   458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)