Query= MSMg01no475_i17.b1 MSMg01no475_i17.b1 CHROMAT_FILE:
MSMg01no475_i17.b1 PHD_FILE: MSMg01no475_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:22 2005
(444 letters)
>mm_chr3_99288775_99289618
Length = 844
Score = 787 bits (407), Expect = 0.0
Identities = 432/441 (97%), Gaps = 3/441 (0%)
Strand = Plus / Minus
Query: 6 gaattcctttgcttcaca--cactttctctggtggaaaattgtaatgatcagtaattatt 63
|||||||||||| | | | |||||||||||||||||| |||||||||||||||||||||
Sbjct: 663 gaattcctttgc-taagaagcactttctctggtggaaacttgtaatgatcagtaattatt 605
Query: 64 acccaaaatctattaaagtgtgccttgtaaagagaacccggatcagatgaaaatgttgga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acccaaaatctattaaagtgtgccttgtaaagagaacccggatcagatgaaaatgttgga 545
Query: 124 gactggagaatatgccctgggatttacttgaaggtggaagaaataacccataaagctagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gactggagaatatgccctgggatttacttgaaggtggaagaaataacccataaagctagg 485
Query: 184 caatacaagttatatagttgatgactgatcttgaagctaagtctctccctcagcccagcc 243
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 484 caatacaagttatatagttgatgactgatcttgaaactaagtctctccctcagcccagcc 425
Query: 244 tgtctaccacagatcattagcctttcaaaagtcttgtactggaagagttgattgtcgtga 303
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 424 tgtctaccgcagatcattagcctttcaaaagtcctgtactggaagagttgattgtcgtga 365
Query: 304 tgaatctaaacatgtgcagtctaataggggacatgaaaccttgcctacagcgagtatgcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgaatctaaacatgtgcagtctaataggggacatgaaaccttgcctacagcgagtatgcc 305
Query: 364 tttgctagaactctgtaatgatgcgcctataaaaatgttccagctattaccaaaagtcct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tttgctagaactctgtaatgatgcgcctataaaaatgttccagctattaccaaaagtcct 245
Query: 424 ggcaagctgaggggttgcatt 444
|||||||||||||||||||||
Sbjct: 244 ggcaagctgaggggttgcatt 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_i17.g1 MSMg01no475_i17.g1 CHROMAT_FILE:
MSMg01no475_i17.g1 PHD_FILE: MSMg01no475_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:22 2005
(200 letters)
>mm_chr3_99106171_99106770
Length = 600
Score = 344 bits (178), Expect = 2e-99
Identities = 190/200 (95%), Gaps = 10/200 (5%)
Strand = Plus / Plus
Query: 1 aacttgactcacaggatccataggcaggaagtgaaagaaaactgtcatgtgtatgtaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttgactcacaggatccataggcaggaagtgaaagaaaactgtcatgtgtatgtaaaa 260
Query: 61 tcaaggtagagaacatagagaatgaaggtggaaatctacgttctgacagccatgctagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaggtagagaacatagagaatgaaggtggaaatctacgttctgacagccatgctagtt 320
Query: 121 acaagttctgagctctacatggctgcataattttgctcacctcatcttgagagtctagaa 180
|||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 acaagttctgagctctacatggctgc----------tcacctcatcttgagagtctagaa 370
Query: 181 gtatgagcacatagtacatg 200
||||||||||||||||||||
Sbjct: 371 gtatgagcacatagtacatg 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
