Query= MSMg01no475_o20.b1 MSMg01no475_o20.b1 CHROMAT_FILE:
MSMg01no475_o20.b1 PHD_FILE: MSMg01no475_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:52 2005
(451 letters)
>mm_chr3_129645743_129646593
Length = 851
Score = 833 bits (431), Expect = 0.0
Identities = 446/451 (98%)
Strand = Plus / Plus
Query: 1 aatatagtaagaccttgtcttacaataacaacaacaactaaataaaagaaggagggaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatagtaagaccttgtcttacaataacaacaacaactaaataaaagaaggagggaggg 260
Query: 61 aggaaaggaagaaagagtgggaaacaggcaggtacaattattaggtaaatcttagtttgg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 aggaaaggaagaaagagtgggaaacaggcaggtacaattattaggtaagtcttagtttgg 320
Query: 121 gtttatccaaacgtagagcctacaacaagggttttgagttccagggcagcttcctggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttatccaaacgtagagcctacaacaagggttttgagttccagggcagcttcctggctg 380
Query: 181 catagcaagttcaaggctagcagacctctatagaaagacccctgcctcaacaataaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catagcaagttcaaggctagcagacctctatagaaagacccctgcctcaacaataaaaag 440
Query: 241 aattaaatgagagagattatattgctatgattaggacaaaggggagcaagagaagtacag 300
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattaaatgagagagatcataatgctatgattaggacaaaggggagcaagagaagtacag 500
Query: 301 taagtatcagagaaaagtcagtacaaccctgaatattcacttcgcatatctcgtgtatca 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 taagtatcagagaaaagtcagtacaaccctgaatattcactttgcatatctcgtgtatca 560
Query: 361 tttgcaactttgtttcatgttcctgatttcttggaaggagaaaaaaagtaattttatact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgcaactttgtttcatgttcctgatttcttggaaggagaaaaaaagtaattttatact 620
Query: 421 tttaactttggcatgcttttgcttttttatt 451
||||||||||| |||||||||||||||||||
Sbjct: 621 tttaactttggtatgcttttgcttttttatt 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_o20.g1 MSMg01no475_o20.g1 CHROMAT_FILE:
MSMg01no475_o20.g1 PHD_FILE: MSMg01no475_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:52 2005
(405 letters)
>mm_chr3_129850456_129851259
Length = 804
Score = 723 bits (374), Expect = 0.0
Identities = 396/408 (97%), Gaps = 10/408 (2%)
Strand = Plus / Minus
Query: 1 atctgcagaacagtggctcccaagctgccagctgctccccactcccctgctgtaagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 atctgcagaacagtggctcccaagctgccagctgctccccactcccctgctgtaagaatg 485
Query: 61 cagccgaggccgaaagcttgtcaccacgttggagccaatatccacctgtccctcttgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cagccgaggccgaaagcttgtcaccacgttggagccaatatccacctgtccctcttgtca 425
Query: 121 gtctccttctgcaaaaatcttcccgggatttaagcacttaagccataaaaactgggattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtctccttctgcaaaaatcttcccgggatttaagcacttaagccataaaaactgggattt 365
Query: 181 gccttcactctttctagaacagctagatacacccatgcattgtatatctcgggatgatgc 240
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 364 gccttcagtctttctagaacagctagacacacccatgcattgtatatctcgggatgatgc 305
Query: 241 c----tttttctttaaaatggtgattaaataaaataacaggtgcacaaagctatcaccgg 296
| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cgcca-----ctttaaaatggtgattaaataaaataacaggtgcacaaagctatcaccgg 250
Query: 297 ccatggcaattactctcgggaattgtgtgctcatttaaattgcatatagatttta-tttt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 249 ccatggcaattactctcgggaattgtgtgctcatttaaattgcatatagattttattttt 190
Query: 356 tttctttttaaatatctgcttattttattttatttgtgttattttatt 403
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tttctttttaaatatctgcttattttattttatttgtgttattttatt 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 804
Length adjustment: 9
Effective length of query: 396
Effective length of database: 795
Effective search space: 314820
Effective search space used: 314820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
