Query= MSMg01no478_p08.b1 MSMg01no478_p08.b1 CHROMAT_FILE:
MSMg01no478_p08.b1 PHD_FILE: MSMg01no478_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:47 2005
(655 letters)
>mm_chr3_13836772_13837826
Length = 1055
Score = 1199 bits (620), Expect = 0.0
Identities = 647/656 (98%), Gaps = 1/656 (0%)
Strand = Plus / Plus
Query: 1 aaatggctgagaagcacctgaaaaaatgtccaacatccttaatcatcagggaaatgcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaatggctgagaagcacctgaaaaaatgtccaacatccttaatcatcagggaaatgcaaa 259
Query: 61 ttaaaacaaccttgagattccacctcacaccagtcagaatggctaagatcaaaaatttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttaaaacaaccttgagattccacctcacaccagtcagaatggctaagatcaaaaatttag 319
Query: 121 gtgacagcagatgatggcgaggatgtggagaaagaggaacactcctccactgctggtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtgacagcagatgatggcgaggatgtggagaaagaggaacactcctccactgctggtggg 379
Query: 181 attgcaagcttgtacaaccactctggaagttagtctggaggttcctcagaaaattggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attgcaagcttgtacaaccactctggaagttagtctggaggttcctcagaaaattggaca 439
Query: 241 at-tattactggaagatccagcaatacttctcctgtgcatatactcagaagaagttccaa 299
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaatattactggaagatccagcaatacttctcctgtgcatatactcagaagaagttccaa 499
Query: 300 ctggtaaaagaacacatgctccactatgttcacagcagccttatttataatagccagaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctggtaaaagaacacatgctccactatgttcacagcagccttatttataatagccagaag 559
Query: 360 ctggaaagaacccagatgtccctcaacagaagaatggatacagaaaatgtgggacattta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctggaaagaacccagatgtccctcaacagaagaatggatacagaaaatgtgggacattta 619
Query: 420 tacaatggagtactactcagctattaaaaacaatgaatttatgaaatttttggacaagtg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tacaatggagtactactcagctattaaaaacaatgaatttatgaaatttttggacaagtg 679
Query: 480 gttgtatctggttgatatcatccttagtgagataaccctccatatgatctttaccccatg 539
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 680 gttgtatctggttgatatcatccttagtgaggtaaccctccatatgatttttaccccatg 739
Query: 540 ttctacctgtctcggcctcagttttccctagtgtgtgttctaaatctccatctaagagag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttctacctgtctcggcctcagttttccctagtgtgtgttctaaatctccatctaagagag 799
Query: 600 cttttcagtcctgcctaccgtctccaggcacttcctaccttaccggtattatgatc 655
||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 800 cttctcagtcctgcctaccttctccaggcacttcctaccttacccgtattatgatc 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_p08.g1 MSMg01no478_p08.g1 CHROMAT_FILE:
MSMg01no478_p08.g1 PHD_FILE: MSMg01no478_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:47 2005
(652 letters)
>mm_chr3_13996169_13997220
Length = 1052
Score = 714 bits (369), Expect = 0.0
Identities = 396/405 (97%)
Strand = Plus / Minus
Query: 1 tctgcctgcctctgcctcctgagtgttaggattaaatgcatgtgccaccatacccggcta 60
||||||||||||| ||||||||||||||||||||||||| ||| |||||| ||||| |||
Sbjct: 807 tctgcctgcctctccctcctgagtgttaggattaaatgcgtgtaccaccacacccgccta 748
Query: 61 tgagcttcattttcaatgggaaataaggagctagcaacatataaatataaatttaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tgagcttcattttcaatgggaaataaggagctagcaacatataaatataaatttaaaata 688
Query: 121 tagtttattccaatatttattagctttatacttccattattttattttaataatttgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tagtttattccaatatttattagctttatacttccattattttattttaataatttgtaa 628
Query: 181 tttaaatatttatttttaaattcttctttcatggacacttaatcttttaattagtactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tttaaatatttatttttaaattcttctttcatggacacttaatcttttaattagtactgt 568
Query: 241 aattattgattaattttaaaagaagtataattttggaattgcatttcatcaattaaggat 300
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aagaaatgattaattttaaaagaagtataattttggaattgcatttcatcaattaaggat 508
Query: 301 aaattcatcttaaaactctacaaaaattgtaaacaattattaactaacttactggcaatt 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaattcattttaaaactctacaaaaattgtaaacaattattaactaacttactggcaatt 448
Query: 361 ttaggcagttaattagaacattaggttatgatttgtggcatttgg 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttaggcagttaattagaacattaggttatgatttgtggcatttgg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
