Query= MSMg01no478_p17.b1 MSMg01no478_p17.b1 CHROMAT_FILE:
MSMg01no478_p17.b1 PHD_FILE: MSMg01no478_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:49 2005
(354 letters)
>mm_chr3_89374450_89375203
Length = 754
Score = 638 bits (330), Expect = 0.0
Identities = 345/354 (97%), Gaps = 7/354 (1%)
Strand = Plus / Plus
Query: 1 taaataccaatagggttttcagaagtcaaggaacttgtttaaaattataggccataaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaataccaatagggttttcagaagtcaaggaacttgtttaaaattataggccataaatt 260
Query: 61 atagtcaagagacagctcacatttgtaaacagctcacccactgtggtgctgttgtccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagtcaagagacagctcacatttgtaaacagctcacccactgtggtgctgttgtccagg 320
Query: 121 agatccaagcagcctcctgggtgatcacaatgtactgtcaccaagacacgatgcctgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatccaagcagcctcctgggtgatcacaatgtactgtcaccaagacacgatgcctgtga 380
Query: 181 tacaggaggtgtcgctgctgcaggctctttggggtccttttgctaaataggttagtggca 240
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacaggaggtgtcgctggtgcagactctttggggtccttttgctaaataggttagtggca 440
Query: 241 tcttctcatcaggggacaggcagacagtccagtctttctctttgcctccctcttcctaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttctcatcaggggacaggcagacagtccagtctttctctttgcctccctcttcctaga 500
Query: 301 gagaagtgaactcaaatctgaactcacattctgaacttagaaggtgacctggcc 354
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 gagaagtgaactcaaatc-------acattctgaacttagaaggtgacctggcc 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_p17.g1 MSMg01no478_p17.g1 CHROMAT_FILE:
MSMg01no478_p17.g1 PHD_FILE: MSMg01no478_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:49 2005
(238 letters)
>mm_chr3_89530931_89531574
Length = 644
Score = 429 bits (222), Expect = e-125
Identities = 236/244 (96%), Gaps = 6/244 (2%)
Strand = Plus / Minus
Query: 1 caccttgttgctcaagatcctccagtctcagcatcttaagtgctgggattacaggtgtgt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 533 caccttgttgctcaagatcctccagtctcagcatcctaagtgctgggattacaggtgtgt 474
Query: 61 gccaccataccaggcattttaactcggtttaaaatgtcactttttcaccattgacaagtt 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 473 gccaccataccaggcattttaacttggtttaaaatgtcactttttcaccattgacaagtt 414
Query: 121 cacagaaatctccatctacacacagaggaaaagatcctctgaagt------cagtgatgg 174
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 413 cacagaaatctccatctacacacagaggaaaagatcctctgaagtcggaggcagtgatgg 354
Query: 175 agatgctgacattaaagacgacagtgatgcagccccaagctgagcaatgccagtagccac 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agatgctgacattaaagacgacagtgatgcagccccaagctgagcaatgccagtagccac 294
Query: 235 tagg 238
||||
Sbjct: 293 tagg 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 644
Length adjustment: 9
Effective length of query: 229
Effective length of database: 635
Effective search space: 145415
Effective search space used: 145415
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
