Query= MSMg01no479_l03.b1 MSMg01no479_l03.b1 CHROMAT_FILE:
MSMg01no479_l03.b1 PHD_FILE: MSMg01no479_l03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:47 2005
(652 letters)
>mm_chr3_152262451_152263502
Length = 1052
Score = 1214 bits (628), Expect = 0.0
Identities = 643/648 (99%)
Strand = Plus / Minus
Query: 5 gaattcattgctttccggtggatcccattcccctagctggactgcttatctgacctcagt 64
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 gaattcattgcctgccggtggatcccattcccctagctggactgcttatctgacctcagt 941
Query: 65 gggagaggattcacctagtcctggagtgacttgatgtgacaaggtgggtagatactcagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 gggagaggattcacctagtcctggagtgacttgatgtgacaaggtgggtagatactcagg 881
Query: 125 ggggcctccccctcctcagaggagaaggttacatgtgagcatgtgagtatgtgtgtgcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 ggggcctccccctcctcagaggagaaggttacatgtgagcatgtgagtatgtgtgtgcac 821
Query: 185 acacatatggacacacacaaagtggggataagtgaagaggaagaaaaaaaatacaactaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 acacatatggacacacacaaagtggggataagtgaagaggaagaaaaaaaatacaactaa 761
Query: 245 atagccaaggaaggaatgggagacattttttaaattggatattaatcagtctaatttctc 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 760 atagccaaggaaggaatgggagacatttttaaaattggatattaatcagtctaatttctc 701
Query: 305 atggattctctttcctccttaattcagacatatgatttactacaatgtaaaaatacctga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 atggattctctttcctccttaattcagacatatgatttactacaatgtaaaaatacctga 641
Query: 365 agaattcacacatttattttgaggcttctagatcgtgtggaagattgatggaagtattga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agaattcacacatttattttgaggcttctagatcgtgtggaagattgatggaagtattga 581
Query: 425 cttttgactctagggctcctacataaaataaaagaacaattctggatttaggaaggcgtc 484
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 580 cttttgactctagggctcctacgtaaaataaaaaaacaattctggatttaggaaggcgtc 521
Query: 485 cctagggaaggagccagagcagacgctagttgcggtgggatataggctgctgtgtgcagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cctagggaaggagccagagcagacgctagttgcggtgggatataggctgctgtgtgcagt 461
Query: 545 tgctggctctctggtgcagccagtgcagtggaagtgcacagtgagagctacaaattacat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgctggctctctggtgcagccagtgcagtggaagtgcacagtgagagctacaaattacat 401
Query: 605 gctgaactgatgtgtaattaatgagtgggacggacggcatgaacacac 652
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gctgaactgatgtgtaattaatgagtgggacggacggcatgaacacac 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_l03.g1 MSMg01no479_l03.g1 CHROMAT_FILE:
MSMg01no479_l03.g1 PHD_FILE: MSMg01no479_l03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:47 2005
(679 letters)
>mm_chr3_152080189_152081267
Length = 1079
Score = 1174 bits (607), Expect = 0.0
Identities = 648/679 (95%), Gaps = 28/679 (4%)
Strand = Plus / Plus
Query: 1 tttgcaatgaagattagttttcagatttgctgttgaatgcttgaatagcccatgaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgcaatgaagattagttttcagatttgctgttgaatgcttgaatagcccatgaatttt 260
Query: 61 attagtacagaaaaacaaccaaagctttgtagcaaggatcgaataaaataaggcttgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attagtacagaaaaacaaccaaagctttgtagcaaggatcgaataaaataaggcttgttt 320
Query: 121 ctattttgtgcctttaggaaacaaatagctgtttttaagcacctagaagatatagttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctattttgtgcctttaggaaacaaatagctgtttttaagcacctagaagatatagttact 380
Query: 181 aaaataagagaattcaaatgaaaatgttgtatttgttataactcaaaagtattttctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaataagagaattcaaatgaaaatgttgtatttgttataactcaaaagtattttctctg 440
Query: 241 cttctgaatgtaatctagcaattgtgtgtgtgtgcctgtgtgtgtgtgtgtgtgtctgta 300
|||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 441 cttctgaaggtaatctagcaattgtgtgtgtgtgcctgtgtgtg-----------c---- 485
Query: 301 tgtgtgtgtgtgtgcgcgcatgtgaataaacaaagagcatctcaaagttggtctgagcgt 360
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 486 -------------gcgcgcatgtgaataaacaaagagcatctcagagttggtctgagcgt 532
Query: 361 ttggatcagttgaattaccttgtgttttaggaaattattttctcttgtttgaaagacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ttggatcagttgaattaccttgtgttttaggaaattattttctcttgtttgaaagacaag 592
Query: 421 acctcatggagctcagagtatatatagctatagctggatgaccttgaacttctcatcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 acctcatggagctcagagtatatatagctatagctggatgaccttgaacttctcatcttt 652
Query: 481 gccatagtgctaagatgacaggggcgtgccactacacttagttcttttatccaccatata 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 653 gccatagtgctaagatgacaggggcgtgccactacacttggttcttttatccaccatata 712
Query: 541 ggtatatagttacctacgtttttctatgtagctttttactttactattatgtaggaattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ggtatatagttacctacgtttttctatgtagctttttactttactattatgtaggaattg 772
Query: 601 ggcagacattgtggcatctttctatgatatatatgagataagcattaagtcacacgttaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ggcagacattgtggcatctttctatgatatatatgagataagcattaagtcacacgttaa 832
Query: 661 agtgagtggaatgatttaa 679
|||||||||||||||||||
Sbjct: 833 agtgagtggaatgatttaa 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
