Query= MSMg01no479_n02.b1 MSMg01no479_n02.b1 CHROMAT_FILE:
MSMg01no479_n02.b1 PHD_FILE: MSMg01no479_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:56 2005
(658 letters)
>mm_chr3_128057724_128058780
Length = 1057
Score = 1234 bits (638), Expect = 0.0
Identities = 650/654 (99%), Gaps = 1/654 (0%)
Strand = Plus / Plus
Query: 5 gaattcattgccattaccatgacagatgccgtaagcaaagaaaaacaaacaatagtaaaa 64
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattgccactag-atgacagatgccgtaagcaaagaaaaacaaacaatagtaaaa 263
Query: 65 taaagggcactgagtatgtggttgtgagactacagagggaagaattaaaaactataccag 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 taaagggcactgagtatgtggttgtgagactatagagggaagaattaaaaactataccag 323
Query: 125 ataggctttattaactcaggaactgtgtgaaagaattaatacggttttagaaataataat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataggctttattaactcaggaactgtgtgaaagaattaatacggttttagaaataataat 383
Query: 185 taaaacttaataactactatagatggtctaagacattattggagacctggtactgccaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taaaacttaataactactatagatggtctaagacattattggagacctggtactgccaaa 443
Query: 245 ggtcagggacagtttctctaagtaattgacatttaatttgaggcttgaagggttccactt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtcagggacagtttctctaagtaattgacatttaatttgaggcttgaagggttccactt 503
Query: 305 gcaatgatctcaagttttattgttcagtggtctggtctcccagtcctaccatgtggtgct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcaatgatctcaagttttattgttcagtggtctggtctcccagtcctaccatgtggtgct 563
Query: 365 ctggagctgtaaggaatggctgctgacagtgtcacctgtttgctgccttgaagaagtcag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctggagctgtaaggaatggctgctgacagtgtcacctgtttgctgccttgaagaagtcag 623
Query: 425 cattacagtttagttctatgacacaaaagggaaaacaaatgaaatcccaaagctttcaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cattacagtttagttctatgacacaaaagggaaaacaaatgaaatcccaaagctttcaat 683
Query: 485 gcagttccccaatggccatttaatatagtctggacaacttggaggcatggatttgtgttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gcagttccccaatggccatttaatatagtctggacaacttggaggcatggatttgtgttg 743
Query: 545 gattactgccaggcagatgtgggggaaattctctgcgtgctagataaagactgccttatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gattactgccaggcagatgtgggggaaattctctgcgtgctagataaagactgccttatc 803
Query: 605 cgtgttctcactgagctgacatcaggggagggaggatttgtcagcactatagaa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cgtgttctcactgagctgacatcaggggagggaggatttgtcagcactatagaa 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1057
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1047
Effective search space: 678456
Effective search space used: 678456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_n02.g1 MSMg01no479_n02.g1 CHROMAT_FILE:
MSMg01no479_n02.g1 PHD_FILE: MSMg01no479_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:57 2005
(640 letters)
>mm_chr3_128247438_128248478
Length = 1041
Score = 1201 bits (621), Expect = 0.0
Identities = 636/641 (99%), Gaps = 1/641 (0%)
Strand = Plus / Minus
Query: 1 agtcttctttctagaggcaaatgaaggctaagtaatctgtggtccaggaaaagaaatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 agtcttctttctagaggcaaatgaaggctaagtaatctgtggtccaggaaaagaaatctt 711
Query: 61 tcccagactccattgggaaatgtttcaggacaagggtgtctgaaggagataaagatagat 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tcccagattccattgggaaatgtttcaggacaagggtgtctgaaggagataaagatagat 651
Query: 121 ttaagacagagaaacacccatgtccagaaacacacacctaagggatcttggagcttggcg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 650 ttaagacagagaaacacccatgtccagaaacacacacctaagggatcttggagcttggtg 591
Query: 181 tgcttacggatcgataaaaacaaattcagagtggtgggaagcagggcacacaaaatggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgcttacggatcgataaaaacaaattcagagtggtgggaagcagggcacacaaaatggca 531
Query: 241 gaaggaaatgattgcagtgtctatatcctaaaagaacattcaggaatgtattcaggtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaaggaaatgattgcagtgtctatatcctaaaagaacattcaggaatgtattcaggtgat 471
Query: 301 taggtgaatcttaatatacaggatatcattatatttagggctttaagcttgagaatcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 470 taggtgaatcttaatatacaggatatcattatatttagggctttaagcttgaggatcaat 411
Query: 361 attagaattgcagtgttaccaaagtatgaattcaacttgagtgtagaagagtggagagtt 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 410 attagaattgcagtgttaccaaagcatgaattcaacttgagtgtagaagagtggagagtt 351
Query: 421 agtaatgtatttataaacaaatgaagggagagctggattcatgtagaattattgttgttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agtaatgtatttataaacaaatgaagggagagctggattcatgtagaattattgttgttg 291
Query: 481 ttgctatatatggtatgatatggaatgaatcttag-aaaaaaatgatttgtttaggatcc 539
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 290 ttgctatatatggtatgatatggaatgaatcttagaaaaaaaatgatttgtttaggatcc 231
Query: 540 agtaagaattttccttttaagagaaaaagaagctgggcagtggtggcacacacctttaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 agtaagaattttccttttaagagaaaaagaagctgggcagtggtggcacacacctttaat 171
Query: 600 cccagcacttgggaggcaaaggcaggtggatttttgagttc 640
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cccagcacttgggaggcaaaggcaggtggatttttgagttc 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
