GACTCACTTTGCAGAGAGGATCCGCGGAATTCCCGCCTTACGCTGTTGTG
AGTTGAGTGCTGAGAAGAACCCTGGGGCTTCTCGAGCATAAGCTTTGCAG
TTATTTAAGCAGTAAAACCATATTTCCCTCAACAACATCTAATGTTGAAG
TGAAGCAATTTAAACACACTTTGGGGTCAGGCATGCCGCTGCATGCATTT
AGTGCCAGCATGGAGGCACCAGGGGCAAGTGGATCTCTGAGTTCAAAGCT
AGTCGTCTGCCTGGTCTACTTGAGCAAGATCCTGGCCAGCTGGAGCTACA
CAGTGAAACCCTGTCAAAAAAAAAAAACAAAACAAAACAAAAAAAAAAAA
AACAAAAAAAACAAACCAACCCTACCCACTTGAGCAAATTGATTAGCTGA
AATATATCAGATTTATGGTAATAATGCTTGCTAATAGGAGAGAAGACTAG
CCTGATTCCATGACAGACTTCAAATTGGCAGTTAAGGAGACTAGTCCTAA
AAACTGGGCAAGTCCAGGCAAGACTAGGCAAGTCAATTACTATAGAAAAA
TCCCAGGCTCCAGCCTTCACGCCCAAGTAACAGAATGTCCCAGCCACCTG
GCCTGAAGGAAGGATAATAGGTCATCAACAGCTTCCAGACTTCCTCAGTG
ACAATTCCCAGATCTCCCCTGCAAGTTTCCTCCCTCACCTAACAGAATGT
CCATTAAG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGATCAGACTGGCCTGTACACACATTTGT
GAGGGTTTATATTGATTAATTGATGTAGGAGGGTCTAGCCCTCTGTGGGC
AGTACCATTCCCTAGGCTATAGAAATAAGCTAGCTAAATATGAACCTGAG
TGAGCTGTATAGTAAGCAGCATTTTCTCATGGTTTCTACTTCAAGTTCTT
GCTTGAGTTTCGACCCTGCCATTCCTCAATGATGGACTATAACCAGGAAA
CTGAAACAAACCCTTTTCTCCCCTAAGTTGCTGTTGATCAGTGTGCTTTA
TTACAGCAACAGAATGAAGCTGGAATACTCACTGAGGGGTAGGGGTGGTG
TCTTAGTCAGGGTTTCTAGTCCTGCACAAACATCATGACCAAGAAGCAAG
TTGGGGAGGAAAGGGTTTATTCAGCTTACACTTTCCACATTGCTGTTGAT
CACCAAAGGATGTCAGGATTGGCACTCAAGCAAGTCAGGAAGCAGAAACT
GAGGCAGAGGCCATGGAGGGATGTTACTTACTGGCTTACTTCCCCTGGCT
TGCTCAGCTTGCTTTCTTATAGAACCCAAGACTACCAGCCCAGGGATGGT
ACCACCCACAATGGGCCCTCCCCTCTTGATCACTAATTGAGAAAATGCCT
TGCAGATGGATCTCATGGAGGCATTTCCTCAACTGAAG

Query= MSMg01no482_f18.b1 MSMg01no482_f18.b1 CHROMAT_FILE:
MSMg01no482_f18.b1 PHD_FILE: MSMg01no482_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:15 2005
         (661 letters)



>mm_chr3_100524207_100525267
          Length = 1061

 Score = 1098 bits (568), Expect = 0.0
 Identities = 622/656 (94%), Gaps = 28/656 (4%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcccgccttacgctgttgtgagttgagtgctgagaagaaccctggggcttctcgag 66
           |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcccgccccaggctgttgtgagttgagtgctgagaagaaccctggggcttctcgag 266

                                                                       
Query: 67  cataagctttgcagttatttaagcagtaaaaccatatttccctcaacaacatctaatgtt 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cataagctttgcagttatttaagcagtaaaaccatatttccctcaacaacatctaatgtt 326

                                                                       
Query: 127 gaagtgaagcaatttaaacacactttggggtcaggcatgccgctgcatgcatttagtgcc 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaagtgaagcaatttaaacacactttggggtcaggcatgccgctgcatgcatttagtgcc 386

                                                                       
Query: 187 agcatggaggcaccaggggcaagtggatctctgagttcaaagctagtcgtctgcctggtc 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agcatggaggcaccaggggcaagtggatctctgagttcaaagctagtcgtctgcctggtc 446

                                                                       
Query: 247 tacttgagcaagatcct-ggccagctggagctacacagtgaaaccctgtcaaaaaaaaaa 305
           |||||||||||||| || |||||||||||||||||||||||||||||||||||||||   
Sbjct: 447 tacttgagcaagat-ctaggccagctggagctacacagtgaaaccctgtcaaaaaaa--- 502

                                                                       
Query: 306 aacaaaacaaaacaaaaaaaaaaaaaacaaaaaaaacaaaccaaccctacccacttgagc 365
                        ||||||||||||||          |||||||||||||||||||||||
Sbjct: 503 -------------aaaaaaaaaaaaaa----------aaaccaaccctacccacttgagc 539

                                                                       
Query: 366 aaattgattagctgaaatatatcagatttatggtaataatgcttgctaataggagagaag 425
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaatttattagctgaaatatatcagatttatggtaataatgcttgctaataggagagaag 599

                                                                       
Query: 426 actagcctgattccatgacagacttcaaattggcagttaaggagactagtcctaaaaact 485
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 actagcctgattgcatgacagacttcaaattggcagttaaggagactagtcctaaaaact 659

                                                                       
Query: 486 gggcaagtccaggcaagactaggcaagtcaattactatagaaaaatcccaggctccagcc 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gggcaagtccaggcaagactaggcaagtcaattactatagaaaaatcccaggctccagcc 719

                                                                       
Query: 546 ttcacgcccaagtaacagaatgtcccagccacctggcctgaaggaaggataataggtcat 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 720 ttcacgcccaagtaacagaatgtcccagccacctggcctgaaggaaggataataggtcac 779

                                                                   
Query: 606 caacagcttccagacttcctcagtgacaattcccagatctcccctgcaagtttcct 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 caacagcttccagacttcctcagtgacaattcccagatctcccctgcaagtttcct 835


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)