CAAGAAACAGGNNTCAGGAGAAAAAAAACCAGAACAAACACGGCCCAAAA
AAGCGCACCACGCATCAAAAAAGAAGAACCCAGCACTTTACCCACCACAC
AACAAAAAGGGGAGGGCCCCCGTAAACCCGACAGACCCAACCACAACCCG
AGAAAACCCAACACCCCCCGAAAGGACCGCAACCAGAAACGCACGAACGA
ACAAAACCAGAACAAGGCAAAACCAAACCGCCAACAAACCG

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGGTCAACATTCAGGAAGA
AACTGAAGCGGCACACAGGAAGTCAAGTGAGCGATGTAAGATGAGAATTA
CATTGTCAAATGAACACCAGGTGTGTTGGAGAATGGGCAAGATAAATAAA
GGCAGGGTCAGGACAACAGACAGCAGAGTGCAGGTGCTAAAGGAGATAGC
AGGCTGGTGCTGGAGTATCAGAAGGGGGGTGGGGGACTAGACCAGGAAAG
GGGCCACTGTGAGCCTCCATTCTCCGGGTGGCACAGGGCAACTCCTGCAG
TCTCTCCCATCTCACGTGCCAGCCCTGTGTGCTCAGAACTTTTACATCTC
CATGAGTTCTGATAAGCTCCATTTTATAGCAGAAGAAAATAATCTGTCTG
TGTAAAATGCCAGCCACTTTGCAGACCCCACCTCTAACCAGCGATGAACA
CTGAATTTATACTTTGGGGCTTTCTCAAGAAAAAAAAATCAAAGATGCCT
GAAAGGATGTTCCTAATATATGCTGTATGACTTTGCTTTCTTATTTTACT
CTCATATCGAAGAGCCAGCATTAAGAAAAAGAATGAAACAGGAAAGCCAA
TGGTGGGATGATGTGATCAGTCTCGTCTGAATCCCAATGATCAATGGCTG
AGGTGACTTTTTCCTCTCATCAGCAATGTCTCAGCTATGTCTGGCTGCTC
CCAA

Query= MSMg01no483_i20.g1 MSMg01no483_i20.g1 CHROMAT_FILE:
MSMg01no483_i20.g1 PHD_FILE: MSMg01no483_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:48 2005
         (665 letters)



>mm_chr3_66464309_66465374
          Length = 1066

 Score = 1257 bits (650), Expect = 0.0
 Identities = 662/666 (99%), Gaps = 1/666 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaggtcaacattcaggaagaaactgaagcggcacacaggaagtcaagtgagcgatgtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaggtcaacattcaggaagaaactgaagcggcacacaggaagtcaagtgagcgatgtaa 260

                                                                       
Query: 61  gatgagaattacattgtcaaatgaacaccaggtgtgttggagaatgggcaagataaataa 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gatgagaattacattgtcaaatgaacaccaggtgtgttggagaacgggcaagataaataa 320

                                                                       
Query: 121 aggcagggtcaggacaacagacagcagagtgcaggtgctaaaggagatagcaggctggtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggcagggtcaggacaacagacagcagagtgcaggtgctaaaggagatagcaggctggtg 380

                                                                       
Query: 181 ctggagtatcagaaggggggtgggggactagaccaggaaaggggccactgtgagcctcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggagtatcagaaggggggtgggggactagaccaggaaaggggccactgtgagcctcca 440

                                                                       
Query: 241 ttctccgggtggcacagggcaactcctgcagtctctcccatctcacgtgccagccctgtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctccgggtggcacagggcaactcctgcagtctctcccatctcacgtgccagccctgtg 500

                                                                       
Query: 301 tgctcagaacttttacatctccatgagttctgataagctccattttatagcagaagaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctcagaacttttacatctccatgagttctgataagctccattttatagcagaagaaaa 560

                                                                       
Query: 361 taatctgtctgtgtaaaatgccagccactttgcagaccccacctctaaccagcgatgaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taatctgtctgtgtaaaatgccagccactttgcagaccccacctctaaccagcgatgaac 620

                                                                       
Query: 421 actgaatttatactttggggctttctcaagaaaaaaaaa-tcaaagatgcctgaaaggat 479
           |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 actgaatttatactctggggctttctcaagaaaaaaaaaatcaaagatgcctgaaaggat 680

                                                                       
Query: 480 gttcctaatatatgctgtatgactttgctttcttattttactctcatatcgaagagccag 539
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttcctaatatatgctctatgactttgctttcttattttactctcatatcgaagagccag 740

                                                                       
Query: 540 cattaagaaaaagaatgaaacaggaaagccaatggtgggatgatgtgatcagtctcgtct 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cattaagaaaaagaatgaaacaggaaagccaatggtgggatgatgtgatcagtctcgtct 800

                                                                       
Query: 600 gaatcccaatgatcaatggctgaggtgactttttcctctcatcagcaatgtctcagctat 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaatcccaatgatcaatggctgaggtgactttttcctctcatcagcaatgtctcagctat 860

                 
Query: 660 gtctgg 665
           ||||||
Sbjct: 861 gtctgg 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1066
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1056
Effective search space:   691680
Effective search space used:   691680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)