Query= MSMg01no486_d11.b1 MSMg01no486_d11.b1 CHROMAT_FILE:
MSMg01no486_d11.b1 PHD_FILE: MSMg01no486_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:27 2005
(632 letters)
>mm_chr3_64806865_64807896
Length = 1032
Score = 1156 bits (598), Expect = 0.0
Identities = 625/634 (98%), Gaps = 3/634 (0%)
Strand = Plus / Minus
Query: 1 ctattcaggccctcaagtgattgaatgaagtgcctccacactacaaagtgcagtctattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1020 ctattcaggccctcaagtgattgaatgaagtgcctccacactacaaagtgcagcctattt 961
Query: 61 ccagtccaccaattcaaatgtcagtctcattgaaaacacc-ttcttagacaagtccaagg 119
||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 960 ccagtccaccaattcaaatatcagtctcattgaaaacaccttttttagacaagtccaagg 901
Query: 120 tagtgtttagtcacgtgtctgaatatcttaagatggtgtcaagttatcatataaaattca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 tagtgtttagtcacgtgtctgaatatcttaagatggtgtcaagttatcatataaaattca 841
Query: 180 gtaccacatgccaactccttgtctttttgggttatgtagattggagatactagaagagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gtaccacatgccaactccttgtctttttgggttatgtagattggagatactagaagagaa 781
Query: 240 cttgagacttttattcaaagatggggaaactgaggttgctatacaagtctataatacttg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 cttgagacttttattcaaagatggggaaactgaggttgctatacaagtctataatacttg 721
Query: 300 gcttagagtctcaaaaacatttgatagaactggaagtaaccccaagataaactatgctat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gcttagagtctcaaaaacatttgatagaactggaagtaaccccaagataaactatgctat 661
Query: 360 tttctattttactggccattgggctggtaatcattcagatttctaagacaattgattgcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tttctattttactggccattgggctggtaatcattcagatttctaagacaattgattgcc 601
Query: 420 catttctactctatttaacattttaaatgaattagttaaaactaacagcaacacagagtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 catttctactctatttaacattttaaatgaattagttaaaactaacagcaacacagagtc 541
Query: 480 acagtgacttcctactttcacccagtttccttctctgtattttctgactacatctcctgc 539
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 540 acagtgatttcctactttcacccagtttccttctctgcattttctgactacatctcctgc 481
Query: 540 cactcatgctcacacctcataaatgctttggctaactcactg-agcaacttgatgaccat 598
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |
Sbjct: 480 cactcatgctcacacctcataaatgctttggctaactcactgaag-aacttgatgaccgt 422
Query: 599 tcagttgcatcccgcaaacaatcaaggatgagat 632
||||||||||||||||||||||||||||||||||
Sbjct: 421 tcagttgcatcccgcaaacaatcaaggatgagat 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_d11.g1 MSMg01no486_d11.g1 CHROMAT_FILE:
MSMg01no486_d11.g1 PHD_FILE: MSMg01no486_d11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:27 2005
(419 letters)
>mm_chr3_64636096_64636914
Length = 819
Score = 803 bits (415), Expect = 0.0
Identities = 418/419 (99%)
Strand = Plus / Plus
Query: 1 atatttgttgatgtgattctgttgaagctcttcatgtggaaggaattatcttgaaataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatttgttgatgtgattctgttgaagctcttcatgtggaaggaattatcttgaaataca 260
Query: 61 tatgtaggctgacacaacaacagctttataaagcattcatgcataatttcctagttcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgtaggctgacacaacaacagctttataaagcattcatgcataatttcctagttcaac 320
Query: 121 atattgctcatttatcacaattgagttcacagacaaggatgaaccataagctgaatcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atattgctcatttatcacaattgagttcacagacaaggatgaaccataagctgaatcaat 380
Query: 181 gacacagaaaacatgatcatttggaaaattcattcatgttttcctctgtcaactactgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacacagaaaacatgatcatttggaaaattcattcatgttttcctctgtcaactactgca 440
Query: 241 aactgatgagcaaccataaattttgagtctaagcaatagaacagaaggaggcagactgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactgatgagcaaccataaattttgagtctaagcaatagaacagaaggaggcagactgta 500
Query: 301 acaagaacaatatattatgagcctaaaaatgcctaaggtaattgtcgaatcattttattt 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaaaacaatatattatgagcctaaaaatgcctaaggtaattgtcgaatcattttattt 560
Query: 361 caccaaggccttattcagggactgatttatttttctagttgatttttttctacttgcca 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caccaaggccttattcagggactgatttatttttctagttgatttttttctacttgcca 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
