TTTTTCTTTTTCTACTCTCTCCTCCTCACTTATAATACACTTCCTTATCT
CAATATACTCTTTAATAATTTTGTCGTGCCTGCTACATACGCACCTCCAC
TATTAGTTACCANCAGGNATGCCAGGNCGGNAATTNNNCATACANCATGT
TCATCCATCGNNAAGACGCCTGGNCTTGNNCGTTCCCCCCACCAATTAAT
GGNTTAATATTCGTAACAAAAAAATTCTCCTTGGTGGCCTCTCTCTTAAT
ATTTAAAATATACAAAAATAAAATCCCCCCCATCCTAACCCATGATAAAT
CTGCGTTCTAAAATATTAAAACCACTTTACTTCACATTTACACACCCCTC
CTCCTTTTTGCCCAGCCCTTTTTACCTTTTTTAAAAAAGCACCCTTCTTC
CAAAAAAAAATTGAGAATCCCTTTTTCCCCTCTTTAAAAAAAAACAACCC
TCTTTTTATTAAAACAACTTTATTTGATTGAAAAAAAAATACCCCGGGGC
GCCCCCAAAAAAAAAAATAAATGTCGCCCCTCCTCCTAGGGCGGTTGTTA
ATATAAAAAGGATAAAATTCATACGGCGTTGGGCCTTATTATTATTCTCT
TCTCTTCTTATAGCTAAAGAGGCGCCTGAACTCACTCCTTCCTACACACT
TAAACGATCACGCGCTTTCCTCTCTTCCCACTCCACGCGACATTAAACCA
TTTTCTATCCTCTATATTTATATTTATATGTCTTTGTCCCGTTTGCGCGC
ACCTCCCGCTTATATCGCACATCATTACAGATCCACAATATTAGTCACTT
ATCTCTCCACCCCTATCTCCTACCCTCTTCCTTTATTTCTATGTCTTCTC
CTATCCTACTCCTTCCAGTATTATACAAGCATTTTGGATCACCCATCTCA
ATCTCCCTCCTTTGACCCACCCGCCATTTANTTNATATTTGTGTGTCTAT
TATATTTCTCTCTTACTCACATATCTATAAAGAAAAA

CCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTGGGCTTCCCTGTTTTTATTTCATTCAT
ACAATAATGCACGGGCTCAATGGAGAGTGTGAGAAACTGGGACCCATTAG
GAGTACTGGATGTGAATAAACTAGTAGGGGTTAAGGGTGGGGACTGTGGC
TAATATGGAAATAAAGAAAGGAATCAATAAGCCAAATGTGCATAGTTTGT
TGTCCTAAATGAAAATTCTATTTCTGGCAACATATTTTCACAAAATACAC
TTTAAAGTTTTCTATGAAAATAGAGAATAAACAAAGTTTTGCTAAAGCTA
TTATCTTTTAAAAGCCAATTACTTTTAAACAATACCATTTCACTTTTTTT
TTTTACAAATGGATAGATTAAAATAAAGAGTATACAAATTATATTAGAAC
AATATAACCTAGACCAAAATAATTTTTTCTGGATTTCAGCATGTTAGCAT
CATAATGGATTCTATATAGGTTATATTTAACTTGTACTTGTCAAGAGATA
AAGGCATCAACTATAGTTAAAGTTATCACACAAAATACTTCTAAAACTGT
ATCTGATTACTATAAATAGGCAAATCTTCCCACCATCCCTAGCTTTCCTC
TCAGGTCATTTCCTCTTAAATAAGCACCGGTATTCTCATCTTTGTAAGCT
CTGGCTCCTCTACTGTGAGCAAGAGAGGTCTCACCACTCAACCTCTTCAC
TGGACAGTA

Query= MSMg01no486_f13.g1 MSMg01no486_f13.g1 CHROMAT_FILE:
MSMg01no486_f13.g1 PHD_FILE: MSMg01no486_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:38 2005
         (638 letters)



>mm_chr3_122259162_122260200
          Length = 1039

 Score = 1207 bits (624), Expect = 0.0
 Identities = 636/640 (99%), Gaps = 3/640 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggcttccctgtttttatttcattcatacaataatgcacgggctcaatggagagtgtga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggcttccctgtttttatttcattcatacaataatgcacgggctcaatggagagtgtga 260

                                                                       
Query: 61  gaaactgggacccattaggagtactggatgtgaataaactagtaggggttaagggtgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaactgggacccattaggagtactggatgtgaataaactagtaggggttaagggtgggg 320

                                                                       
Query: 121 actgtggctaatatggaaataaagaaaggaatcaataagccaaatgtgcatagtttgttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgtggctaatatggaaataaagaaaggaatcaataagccaaatgtgcatagtttgttg 380

                                                                       
Query: 181 tcctaaatgaaaattctatttctggcaacatattttcacaaaatacactttaaagttttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctaaatgaaaattctatttctggcaacatattttcacaaaatacactttaaagttttc 440

                                                                       
Query: 241 tatgaaaatagagaataaacaaagttttgctaaagctattatcttttaaaagccaattac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgaaaatagagaataaacaaagttttgctaaagctattatcttttaaaagccaattac 500

                                                                       
Query: 301 ttttaaacaataccatttcacttttttttttt-acaaa-tggatagattaaaataaagag 358
           |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 501 ttttaaacaataccatttcacttttttttttttacaaactg-atagattaaaataaagag 559

                                                                       
Query: 359 tatacaaattatattagaacaatataacctagaccaaaataattttttctggatttcagc 418
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 560 tatacaaattatattagaacaatataacctagactaaaataattttttctggatttcagc 619

                                                                       
Query: 419 atgttagcatcataatggattctatataggttatatttaacttgtacttgtcaagagata 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgttagcatcataatggattctatataggttatatttaacttgtacttgtcaagagata 679

                                                                       
Query: 479 aaggcatcaactatagttaaagttatcacacaaaatacttctaaaactgtatctgattac 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaggcatcaactatagttaaagttatcacacaaaatacttctaaaactgtatctgattac 739

                                                                       
Query: 539 tataaataggcaaatcttcccaccatccctagctttcctctcaggtcatttcctcttaaa 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tataaataggcaaatcttcccaccatccctagctttcctctcaggtcatttcctcttaaa 799

                                                   
Query: 599 taagcaccggtattctcatctttgtaagctctggctcctc 638
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 taagcaccggtattctcatctttgtaagctctggctcctc 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1039
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1029
Effective search space:   646212
Effective search space used:   646212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)