GCCNNNNNNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCA
AGGATCCGCGGAATTCTGCTTGTTCTCCAGTCTCTTAGCTTATTTCTTTT
TATTGGGGAATTGAGTGCACTGATATTGAGAGATATTAAAGACAGATGAT
TGTTAGTTCCTATTATGTTTGTTGTTGTAGGTGGCATTCTGTGTCTGTGA
TTCTCTCCTTTTGGTTTTGTTGTGAGATGATTAATTTCTTGTTTTTTCCT
TTAGTGTTGTTACCCTCCTTTTATTGCAGTTTTCCTTCTAGAATCCTCTG
AAGACTGAATTAGAAGATAGATATTGTTTAAACCTGGTTTTGTCATGGAA
TATCTTGGTTTCTGCATCTACTGTGATTGAGAGTTTTACATGGTATAGTA
GCCTGGGCTGGAATTTGTGTTCTCTTAGGGTCTGCATATCTTCTGTCCAG
GCTATTCTGGGTTTTAGGTCTCTGTTGAGAAGTCTGGTATAATTCTGATA
GGTCTGCCTTTATATGTTACCTGGCTTTTCCTCTTACAGCTTTTAATATC
CCTTTTTTGTTCCTTCTGTACATTTAGTGTTTTGATTTAGTGTTGTGTCA
ATATCTTCTATGCCTGAGATTCTCTCTTCTATCTCTTGTATTCTGTTGTT
GATGCTTGCATCTGTAGCTCCTGACCTCGTTCCTAGGTTTTCCATTTTCA
GAATTGCCTCCA

CCATGACAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATAGCCTTTTGCATTCTTTTAGATCA
AGAGCTACACATAGACTAGTTAGTACCTGTATACATGCATAAACATACAT
GTACACACACATACATACATACATGTACATCATGTTAAAGTTTACATGCA
TGTAATTTATATTCTTCTTCTAGAACTCATTAATATTGAAAAAGCTTTAA
CACATTATTGGAAGAAATGTGCCCAAACTAAGTATGACTTAGGAAAGATT
TGTCAGATTAAACATACACATAATTACAAAATGGCTTCAATTGCCCTTTA
AACCATAAAGCATAAACCAGACCTCCAGTGTTTCCCCTTTGGTAAAATAT
TCCCTAATGACAATTCGTTTTGTGAAGTATTTGTGGAGAAGTTTATTCCA
CTGGGTGGATCGATTGCTTCATTCTCTTGAAAACTCAGCTTTTAGGTCTA
TGTTTTAAAAGAGCTTGTATTAAACAAGAAATATGGAAGAAGCCGACCTT
ATTGATAAAACCATGTTGAAGGAACCCATTGACCAGCAGACTTGAATGCA
AAGGTCATTGAATTAAATCATTTGTAAGCTAGTTATTAAAAGCCCAAGTG
CCTTTTTGTAAAATCAAAATAGTATGCAAAGCTCCCAGTACAAAGTAGAG
AAATCACGGGTAAAACAGGAAATCCCCCGTACCTATAAACAAACACTGTT
GGAAGATAG

Query= MSMg01no486_f18.g1 MSMg01no486_f18.g1 CHROMAT_FILE:
MSMg01no486_f18.g1 PHD_FILE: MSMg01no486_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:39 2005
         (590 letters)



>mm_chr3_136479468_136480457
          Length = 990

 Score = 1110 bits (574), Expect = 0.0
 Identities = 586/590 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagccttttgcattcttttagatcaagagctacacatagactagttagtacctgtatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagccttttgcattcttttagatcaagagctacacatagactagttagtacctgtatac 260

                                                                       
Query: 61  atgcataaacatacatgtacacacacatacatacatacatgtacatcatgttaaagttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcataaacatacatgtacacacacatacatacatacatgtacatcatgttaaagttta 320

                                                                       
Query: 121 catgcatgtaatttatattcttcttctagaactcattaatattgaaaaagctttaacaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgcatgtaatttatattcttcttctagaactcattaatattgaaaaagctttaacaca 380

                                                                       
Query: 181 ttattggaagaaatgtgcccaaactaagtatgacttaggaaagatttgtcagattaaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttattggaagaaatgtgcccaaactaagtatgacttaggaaagatttgtcagattaaaca 440

                                                                       
Query: 241 tacacataattacaaaatggcttcaattgccctttaaaccataaagcataaaccagacct 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacacataagtacaaaatggcttcaattgccctttaaaccataaagcataaaccagacct 500

                                                                       
Query: 301 ccagtgtttcccctttggtaaaatattccctaatgacaattcgttttgtgaagtatttgt 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ccagtgtttcccctttggtaaaatattccctaatgacaattagttttgtgaagtatttgt 560

                                                                       
Query: 361 ggagaagtttattccactgggtggatcgattgcttcattctcttgaaaactcagctttta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggagaagtttattccactgggtggatcgattgcttcattctcttgaaaactcagctttta 620

                                                                       
Query: 421 ggtctatgttttaaaagagcttgtattaaacaagaaatatggaagaagccgaccttattg 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 ggtctatgttttaaaagagcttgtattaaacaaaaaatatggaagaagccgaccttattg 680

                                                                       
Query: 481 ataaaaccatgttgaaggaacccattgaccagcagacttgaatgcaaaggtcattgaatt 540
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 ataaaaccatgttgaaggaacccattgaccagcagacttgaatgtaaaggtcattgaatt 740

                                                             
Query: 541 aaatcatttgtaagctagttattaaaagcccaagtgcctttttgtaaaat 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaatcatttgtaagctagttattaaaagcccaagtgcctttttgtaaaat 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)