GGGGNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGA
TCCGCGGAATTCACTAAATAATATGCACGGGATATATTTCCCCCTTCTTT
GTCTTTTAAGAATCTAGTTTTAAAGTTTCACAATACCTTGTCCTCAAGAA
TTAATAATTTGTTGACAAAACATCTCAAATATTTGACTGTTATAGTCAGT
ATTAATGTAACATGGGCAGTGACTAATTGCACTTTCAATTGTTTCTCTTA
AAGAGCGGTTGTAACTAGAAAGCTTGAAAAGTTATTAATAGTCACATGTG
CATAATTTATTCAGAAATAAGAGCATTCGTTTGCAGCAATTGATTAAGTA
TAAATCTTCAAGAGTTAACACTATTATGTGGAAACAAGTAGTAACTGAGG
ACACTAATAGCAAAGAATTTGACATGCACAATTTCCAAGAATACTAAAAT
ATTATCTTAAACCATAACTGTTTTGAATATATAAAGAATGAGATAATATA
ATCTATCTTATATGGAGGATCTATCGACTGCCTGAGATATAAATCCAGCG
TGGCATTGCTTTAAGATGTCTAGGCAATCTAGAACATTTATTAAATATCC
AAAAACAGCCTTCTAAAAAGGACAACATTTTTTCTTATGAGTTGTATATG
CATAAGCAATTGCAAATTTGAGAATTAATAGCATCTGAAGGACGAACAAT
CTTAAGCAATTGTGAGCTCTGAGATATAATATTGAC

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTAGAAAGGGCTCATATTATACTT
GCTCACAAGTGTTACCTGAGAAACTTGTCCTAAACTAGCATGGAAAAACA
AGTCCAAACATTTTTAACCGTTGAGTACTTTATTTAAGCTAAATTGTATC
TAGAAGCTAAGCATGTAGCAGGTAAATGAGGGCTGCTCTGTTACTGAGGC
AGGATACTTGTCTTGAGTAATTACCTTCTGTCTGTATTGCTCAGTGATTG
GTTAGCGCATCACCCCTCCTCAGCCACACAGATGGAGCCTGTACGTGAGC
CTCCTCTGTACAGGTCACCAAGAAATCCTGTTGAACCTGGTCCCTGTGGT
TTGTTAGTCAGTAGTGGTGGCTCACACCTTTAATCCCAGCACTCACCCCA
GCACTCAGGGGCAGGCGGACTTCCCAGTTCAAGGCCAACCTGGTAAGTTC
CTGGACAACCAGGGCTATACAGAGAAACCCTGTCTCGAAAAACAAAACAA
AACAAAACAACAACAACAACAACAAAAGAACTCTTTGAAAGGATTACCTT
GGAGTAGGGCTCTGGGGAGGCTTCGCTTGCCTATGACAGAGCAGTGAGAG
CCGCATTGGGTAGGCAGGGTGTGTGGATGTGAGTCTGCTCTTGAAACTGT
CTGTCTACCATGGAGATCCTCTTTCTGCTGTGTTCTAGGTTAGGCCTCCT
ATGGCCTCANGTCACAAACAGCAATACCA

Query= MSMg01no486_k24.g1 MSMg01no486_k24.g1 CHROMAT_FILE:
MSMg01no486_k24.g1 PHD_FILE: MSMg01no486_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:03 2005
         (621 letters)



>mm_chr3_83817745_83818765
          Length = 1021

 Score =  977 bits (505), Expect = 0.0
 Identities = 527/541 (97%), Gaps = 11/541 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttagaaagggctcatattatacttgctcacaagtgttacctgagaaacttgtcctaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tttagaaagggctcatattatacttgctcacaagtgttacctgagaaacttgtcctaaac 471

                                                                       
Query: 61  tagcatggaaaaacaagtccaaacatttttaaccgttgagtactttatttaagctaaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tagcatggaaaaacaagtccaaacatttttaaccgttgagtactttatttaagctaaatt 411

                                                                       
Query: 121 gtatctagaagctaagcatgtagcaggtaaatgagggctgctctgttactgaggcaggat 180
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtatctagaagctaagcatgtaacaggtaaatgagggctgctctgttactgaggcaggat 351

                                                                       
Query: 181 acttgtcttgagtaattaccttctgtctgtattgctcagtgattggttagcgcatcaccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acttgtcttgagtaattaccttctgtctgtattgctcagtgattggttagcgcatcaccc 291

                                                                       
Query: 241 ctcctcagccacacagatggagcctgtacgtgagcctcctctgtacaggtcaccaagaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ctcctcagccacacagatggagcctgtacgtgagcctcctctgtacaggtcaccaagaaa 231

                                                                       
Query: 301 tcctgttgaacctggtccctgtggtttgttagtcagtagtggtggctcacacctttaatc 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 230 tcctgttgaacctggtccctgtggtttgttagtcagtagtggtggcgcacacctttaatc 171

                                                                       
Query: 361 ccagcactcaccccagcactcaggggcaggcggacttcccagttcaaggccaacctggta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ccagcactcaccccagcactcaggggcaggcggacttcccagttcaaggccaacctggta 111

                                                                       
Query: 421 agttcctggacaaccagggctatacagagaaaccctgtctcgaaaaacaaaacaaaacaa 480
           |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 110 agttccaggacaaccagggctatacagagaaaccctgtctcgaaaaacaaaacaa----- 56

                                                                       
Query: 481 aacaacaacaacaacaacaaaagaactctttgaaaggattaccttggagtagggctctgg 540
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  ------aacaacaacaacaaaagaactctttgaaaggattaccttggagtagggctctgg 2

            
Query: 541 g 541
           |
Sbjct: 1   g 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)