XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTGA
TCTTTCCAAGACTTTTATGATGAATGGATGTTGGATTTTGTCAAATACTT
TCTCAGCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTT
ATATACTGGATTACGTTGATGGATTTCCATATATTGAACAATCCCTGCAT
CCATGGAATGAACCTACTTGGTCAGGATGGATGATTGTTTTGATGTGTTC
TTGGATTCGGTTAGCAAGAACTTTATTGAGGATTTTTGCATCGATATTCA
TAAGGGAAATTGGTCTGAAGTTCTCTATCATTGTTGGGTCTTTTGTAGTT
TAGGTATCAGAGTAATTGTGGCTTCATAGAATGAGTTGGGTAGAGTACCT
TCTGTTTCTATTTTGTGGAATAGTTTGTGAAGACCTGGGACTAGATCTTC
TTTGAAGGTCTGATAGAACTCTGCACTAAACCCATCTGGTCCTAGGCTTT
TTTTGGTTGGGAGACTATTAATGACTGCTTCTATTTCTTTAGGGGATAAA
GGACTGTTTAGATTATTAACCTGATCTTGATTTAACTTTGGTACCTAGTA
TCTGTTTAGAAACTTGTCCATTGCATCCAGGTTTTCCAGTTTTGTTGAGT
ATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGGATTTGTTCAGGATCT
GTTGTCATGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTCTTGAACTGAAGTTGAGGTGCAGGTTGAGGGAGATCCTGG
TGATTGGCTTTTTAATGGTACAAATCTTGTTGTGGTGTGACCCTCTAAAG
AACTTCTAGGTAGAGTTCTATAGTCTTGGGTACTAGGAATCATGAGAGGA
TTACTTGGGACCACTGGACATGAAAACCTCTAAATCATATCCATGGGGCA
CAGAGGTGTATGTCTATAGTGCTAAGTATGGGGACAGAGAGAGACAGGTA
GATTCTTGAGCTTATAACCACCAATTTCCAGGTTCAGTGAGACACCCTGA
CTCAAAATGTAGGGTAAAATATCATAGAGGATTCTACCCTCCACATGCAT
AGACTAGTATATCTGTGAGTAGATTCGTGTGTGAGTACATGCATACATAT
AAGACACATTCAAAAGTCACTTTTGAAGCAGACAGAGTCTCTGCATGTAT
TTTCAGTCAAAGGAAGGAAAAGGAAGTGTTCTTCTGGAGATGGGGAATGT
AAAAAGGGCCCTTTGTCTTTTCCTTGTAACAGTCTTTCTTTATATCATGC
CCCCTACCCCAGTCACAGCCATGCTTTGGTTAGAGCTGCTTAGATAGNTT
GTATTGCTGTGTCCCTACAAGGTGGCTCAGGAAGCTGTTCAAGTCTC

Query= MSMg01no488_f02.g1 MSMg01no488_f02.g1 CHROMAT_FILE:
MSMg01no488_f02.g1 PHD_FILE: MSMg01no488_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:12 2005
         (609 letters)



>mm_chr3_33186890_33187898
          Length = 1009

 Score =  930 bits (481), Expect = 0.0
 Identities = 599/696 (86%), Gaps = 87/696 (12%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttgaactgaagttgaggtgcaggttgagggagatcctggtgattggctttttaatggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tcttgaactgaagttgaggtgcaggttgagggagatcctggtgattggctttttaatggt 173

                                                                       
Query: 61  acaaatcttgttgtggtgtgaccctctaaagaacttctaggtagagttctatagtcttgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 acaaatcttgttgtggtgtgaccctctaaagaacttctaggtagagttctatagtcttgg 233

                                                                       
Query: 121 gtactaggaatcatgagaggattacttgggaccactggacatgaaaacctctaaatcata 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 234 gtactaggaatcatgagaggattacttgggaccactggacatgaaaacctctaaatcaca 293

                                                                       
Query: 181 tccatggggc-------------------------------------------------- 190
           ||||||||||                                                  
Sbjct: 294 tccatggggctgggggagatggtagagctgatcaaatgcttaccatgcaagtgtgaggac 353

                                                                       
Query: 191 -------------------------------------acagaggtgtatgtctatagtgc 213
                                                |||||||||||||||||||||||
Sbjct: 354 ctaggctttttctttagcaccatgtaaaaacccaggcacagaggtgtatgtctatagtgc 413

                                                                       
Query: 214 taagtatggggacagagagagacaggtagattcttgagcttataaccaccaatttccagg 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 taagtatggggacagagagagacaggtagattcttgagcttataaccaccaatttccagg 473

                                                                       
Query: 274 ttcagtgagacaccctgactcaaaatgtagggtaaaatatcatagaggattctaccctcc 333
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 474 ttcagtgagacaccctgactcaaaatgtagggtaaaatatcatagaggattctatcctcc 533

                                                                       
Query: 334 acatgcatagactagtatatctgtgagtagattcgtgtgtgagtacatgcatacatataa 393
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 534 acatgcatagactagtatatctgtgagtagattcgtgtgtgagtacatacatacatataa 593

                                                                       
Query: 394 gacacattcaaaagtcacttttgaagcagacagagtctctgcatgtattttcagtcaaag 453
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 594 gacacattcaaaagtcacttttgaagcagacacagtctctgcatgtattttcagtcaaag 653

                                                                       
Query: 454 gaaggaaaaggaagtgttcttctggagatggggaatgtaaaaagggccctttgtcttttc 513
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 654 gaaggaaaaggaagtgttcttctggagatggggaatgtaaaaggggccctttgtcttttc 713

                                                                       
Query: 514 cttgtaacagtctttctttatatcatgccccctaccccagtcacagccatgctttggtta 573
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 714 cttgtaacagtctttctttatatcatgccccctcccccagtcacagccatgctttggcta 773

                                               
Query: 574 gagctgcttagatagnttgtattgctgtgtccctac 609
           ||| | ||||||||| ||||||||||||||||||||
Sbjct: 774 gaggtacttagatagtttgtattgctgtgtccctac 809


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)