NGGTCTATATTTGCGGCCGCGAAACGAATCACTATTTCCTAGTAGGCGCG
GAANTCNCACCTTAGCTAACACAAGGGGNAGAGAAGCACTTGAAAAAATG
TTCAACATCCTCAATCATCAGGCAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
TTATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA
GAAAACTGGACATAGTTTTATCGTTTGATCCAGCAACACCTCTCCTGGGC
ATATATCCAGAATATGCCCCAACAGGTAAGAAGGACACATGCTCCACTAT
GTTCATAGCAGCCTTATTCCACCTAGCCAGAAGCTGGAAAGAACCTAGAT
GCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATG
GAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAA
ATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAA
GAAACTCACACAATATGTATTCACTTATAAGTGGATATTAGCCCCAAATC
TTTTTTATTCAAGATATAAGATATAATTTGCTAAACACATGAAACTCAAG
GAGAATGAACACTGAAGTGTGGACACTATGGCCCTCCTTAGATTTGAGAA
AA

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCATCAGAGGAAACTCTTA
CAGTTGATCAACAGTTTCAGACAAGTAGCTCGATATAAAAGTAATTCATA
AAAAAAAACAGTTTGCCTGCTATACACAAATGAGAAAGGACTGAGAGAGA
AAGCAGGGAAACAAAACCTTTCATGATAGCCTCAAATAATATAAAAGATC
TTAAGAAAGCAATAAAAGATTTGTATGATAAAACATCAAGTCTTTGAAGA
AAGAAATTGTAGAAGATGTCAGAAGATGTTTTTATTCCCATTGCTCATGT
CTGGAGGATTAACATAATAACAATGGTCAGCCTATCTGAAGCAATATGCA
GTTAAATTCTATTCCTATCAAAATTCCAATATAACTCTTTACAGATGTTA
AAAAGGTAGTAGTTTTCAGCTCATATGGAAACCCAAAGAGACACAAAAAC
ATGATAACGAAAATAGTTCTGAATAATAAAAGAATTTCTGGAAGGCTCAC
CTTCCCTAATTTTAAGTAGTACTATAGTAATAAAAATAGCTTGGTTAATT
AATCCCTGATAATACGTTAATATTGGTACCGCAAAGAAAGTAGACAAACT
GATAAATGCATTAGTATAATACAGTAAAAATTTAAAAGTTCAGCTGCCTT
TTTAAATGTATAGTTCTTTTAAGACTTAAATTTTCATCTTATATACATAT
GTAT

Query= MSMg01no490_k12.g1 MSMg01no490_k12.g1 CHROMAT_FILE:
MSMg01no490_k12.g1 PHD_FILE: MSMg01no490_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:18 2005
         (671 letters)



>mm_chr3_113808760_113809831
          Length = 1072

 Score = 1077 bits (557), Expect = 0.0
 Identities = 643/679 (94%), Gaps = 19/679 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccatcagaggaaactcttacagttgatcaacagtttcagacaagtagctcgatataaaag 60
           |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 205 ccatcagaggaaactcttacagttgatcaacattttcagacaagtagttcgttataaaag 264

                                                                       
Query: 61  taattcataaaaaaaaacagtttgcctgctatacacaaatgagaaaggactgagagagaa 120
           ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 taattcat--aaaaaaacagtttgcctgcaatacacaaatgagaaaggactgagagagaa 322

                                                                       
Query: 121 agcagggaaacaaaacctttcatgatagcctcaaataatataaaagatcttaagaaagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agcagggaaacaaaacctttcatgatagcctcaaataatataaaagatcttaagaaagca 382

                                                                       
Query: 181 ataaaagatttgtatgataaaacatcaagtctttgaagaaagaaattgtagaagatgtca 240
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 383 ataaaagatttgtatgataaaacatcaagtctttgaagaaagaaattttagaagatgtca 442

                                                                       
Query: 241 gaagatgttttt-----attcccattgctcatgtctggaggattaacataataacaatgg 295
           |||||||          || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaagatg-----caaagatccccattgctcatgtctggaggattaacataataacaatgg 497

                                                                       
Query: 296 tcagcctatctgaagcaatatgcagttaaattctattcctatcaaaattccaatataact 355
           | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 498 ttagcctatctgaagcaatatgcagttaaattcaattcctatcaaaattccaatataatt 557

                                                                       
Query: 356 ctttacagatgttaaaaaggtagtagttttcagctcatatggaaacccaaagagacacaa 415
           ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||
Sbjct: 558 ctttacagatgttaaaaaggtagt---tttcagctcatatggaaacccaaagagacacaa 614

                                                                       
Query: 416 aaacatgataacgaaaatagttctgaataataaaagaatttctggaaggctcaccttccc 475
           ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 615 aaacatgataacgaaaatagtcctgaataataaaagaatttctgggaggctcaccttccc 674

                                                                       
Query: 476 taattttaagtagtactatagtaataaaaata-gcttggttaattaatccctgataatac 534
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 675 taattttaagtagtactatagtaataaaaataagcttggttaattaatccctgataatac 734

                                                                       
Query: 535 gttaatat-tggtaccgcaaagaaagtagacaaactgataaatgcattagtataatacag 593
           |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 735 gttaataactggtaccgcaaagaaagtagataaactgataaatgcattagtataatacag 794

                                                                       
Query: 594 taaaaatttaaaagttcagc-tgcctttttaaatgtatagttcttttaagacttaaattt 652
           |||||||| |||||||| || |||| ||||||||||||| |||||||||| |||||||||
Sbjct: 795 taaaaattaaaaagttc-gcctgccattttaaatgtatatttcttttaagccttaaattt 853

                              
Query: 653 tcatcttatatacatatgt 671
           |||||||||||||||||||
Sbjct: 854 tcatcttatatacatatgt 872


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1072
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1062
Effective search space:   701982
Effective search space used:   701982
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)