CGCTATACGACTCACTATATTCAGAGGATCCGCGGAATTCTCATAGACTC
TTGAAGTATTGCAAGTGATTGCATTACTCTTTGTTACCCTCTAGAACTTG
ATGGTATTTTCATTGCTGAAGTCCTAGAACTTGGTGCTGTCCATTGAGTC
CTAGAATGTGGTGAAATCAAATTTAAACTGACATGGACATTTATCTTTAC
TGGATAATTTTCATTGTGTTGGAAAGTGCTATGAAGATCACTTGATGGAA
AAGTAAAAATCAACCTTCTCTAGCAGTGAAACCTGACATCTGTAATAACT
GGCCTGACAAGATAGGTGCACTGGTAATAACTACTTTCCAATTGTATATA
ATCCCTACTCTAGAAGATGGAATTATGTGGCCAAAGACTTAGGTCTTGAA
AAATCATATGCTCTTAGGAAACTCATAAATATATATGATTTGGCATAGTT
TGTCCCACTGAAATTTATTGGAGACACTTTCTGAACACCAACTCCTACTG
TAGTCATTCTGACAATGCTTAAAGCATGTTTCTATGACACTGAATGTTTG
GGTTACTTCAGTAGATTTACAGAATGTAAACACATATGAATTATCAAATA
TTAGTGCATGAGAAGGAGGTATGAAAGAGGATAAGGAAGTGAGAGGGGGG
AGATGGAGAAAGGAGAATATATGTAAGGGTTGGNNTTTNTNTTTTTTTTT
GTTTNNTGGNTTTTTTGTTTTGGTTGTGGTTGGTTTTTGTGTTTTGTTNT
TTTGTGTTTTTNGTTTTTTTTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTCACCTGAGTAATACCAAATGGCTGAGAAGCACTTGAA
AAAATGTTCAGCATCATTAATCATCAGGGAAATGCAAATCAAAACAATCC
TGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGT
GACAGCAGATGCTGGTGTGGATGTGGAGAAAGAGGAACACTCCTCCATTG
TTGGTGGGATTGCAAGCTTGTACAACCATTCTGGAAATCAATCTGGCAGT
TCCTCAGAAAATTGGACATAGTACTACCAGAGGATCAAGCAATACCTCTC
TTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAAGAACACATGCTC
CACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTAGAAAGAAC
CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTAC
ACAATGGTGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCT
AGGCAAATGGATGGACCTTGAGGGCATCATCCTGAGTGAGGTAGCACAAT
CACAAAAGAACTCACATGATATGTATTCACTGATAAGTAGATATTAGCCC
AGAAACTTAGTATACCTGAGATATAAGAGACAATTTGTAAAACACATGGA
ACTCAAGAAGAATGAAGACCAAAGTGTGGACACTTTGCACCTTCTTAGAA

Query= MSMg01no494_c22.b1 MSMg01no494_c22.b1 CHROMAT_FILE:
MSMg01no494_c22.b1 PHD_FILE: MSMg01no494_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:58 2005
         (590 letters)



>mm_chr3_81313932_81314921
          Length = 990

 Score =  909 bits (470), Expect = 0.0
 Identities = 557/588 (94%), Gaps = 6/588 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   gaattctcatagactcttgaagtattgcaagtgattgcattactctttgttaccctctag 67
           |||||||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 204 gaattctcataggc-cttgaagtagtgcaagcgattgcattactctttgttaccctctag 262

                                                                       
Query: 68  aacttgatggtattttcattgctgaagtcctagaacttggtgctgtccattgagtcctag 127
           |||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||
Sbjct: 263 aacttgatggtattttcattgctgaattcctagaacttgatgttgtccattgagtcctag 322

                                                                       
Query: 128 aatg-tggtgaaatcaaatttaaactgacatggacatttatctttactggataattttca 186
           |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 323 aatgttggtgagatcaaatttaaactgacatggacgtttatctttactggataattttca 382

                                                                       
Query: 187 ttgtgttggaaagtgctatgaagatcacttgatggaaaagtaaaaatcaaccttctctag 246
           |||||||||||||| ||||||||| ||||||||| |||||||| | ||||||||||||||
Sbjct: 383 ttgtgttggaaagtactatgaagaccacttgatgaaaaagtaagactcaaccttctctag 442

                                                                       
Query: 247 cagtgaaacctgacatctgtaataactggcctgacaagataggtgcactggtaataa--- 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 443 cagtgaaacctgacatctgtaataactggcctgacaagataggtgcactggtaataacta 502

                                                                       
Query: 304 -ctactttccaattgtatataatccctactctagaagatggaattatgtggccaaagact 362
            ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tctactttccgattgtatataatccctactctagaagatggaattatgtggccaaagact 562

                                                                       
Query: 363 taggtcttgaaaaatcatatgctcttaggaaactcataaatatatatgatttggcatagt 422
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 563 taggtcttgaaaaatcatatgctcttaggaaactcataaatatatatgatttggcacagt 622

                                                                       
Query: 423 ttgtcccactgaaatttattggagacactttctgaacaccaactcctactgtagtcattc 482
           || ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 623 ttctcccactgaaatttattggagacactttctgaacaccaagtactactgtagtcattc 682

                                                                       
Query: 483 tgacaatgcttaaagcatgtttctatgacactgaatgtttgggttacttcagtagattta 542
           ||||||  ||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 683 tgacaacacttaaagcatgtttctatgacgcagaatgtttgggttacttaagtagattta 742

                                                           
Query: 543 cagaatgtaaacacatatgaattatcaaatattagtgcatgagaagga 590
           |||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 743 cagaatgtgagcacatatgaattatcaaatattagtgcatgagaagga 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)