XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCAAG
GTTTCACAATATTACTGAGGCCTTGGAGTGCTCACAAAAAGGGATCTATC
ATGGCTGCCCTGTGAAAGACCCAACAAGCAGCTGAAAGAGTCAGATGCAG
ATATTTGCACCCAACCAATGGACAGAAGCAGCTGGCCCCTGTGGTTGAAT
CGGGGAAGGCTGAAAGAAGCTGAGGGGAAGAGCCATCCTGTAGGAGGACC
AGCAGTCTTAATTAATCTGAACCTCTGAGATCTCTCAACACTCGACCACC
AAACAGGCAGCTTACACCAGCTGATATGAGGCCCCCAACACACATATACA
GTAGAGGACTTCCAGATCTGTGTTCATTCAGAGATGATGCACCTAACCCT
CAAGAGACTTGAGGCCCCAGGGAGTTTAGAGGTCAGGTGGGGTGGGGAGG
AGGTGTGGGATATGGAGCNNANGNNNNNNNNNNNNNNGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTTNNNNNNNNNNNNNNNNNNTTNTTT
NTTTTTTNNNTTTTNNTTTTTTNTCTTTTTTTTNNTTTNNTTTTNTTTTT
TTTTTTGTTTGTGGTGGNGTTNGTTGGTGTGTTTGTTTGGTGGTGTGTTT
GTGTTTTTTGTTTGTTTTTTGGTTTTTCTTTTTTTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAATTTTGCTGTTGATGGACCAGCTGAAGAAGTTTT
GGCTGCAAAAGCTGCCCATCCAGTTAGGCCACTAGTTACCGAAGAGGACA
CGTTGTTACTAGAAGAATTTCCTGAAATAACCGTGGATGGCTAAAAAAAA
TAAAAAATATAAGTCTTACATTAGAGCCAAATATAATCAACACCTGTATG
TCTTTGAATATAAATGCTTACTTGTATATAAAGAAGTAATGCATGGACAA
TATGGACAACACAACAAAATTAGGTTCTTATGAAGCTGAATTGGGAAACA
CATGGGCGTTTCTGTAGTCAGGGAGACTGCTACACAACTTGCAGTTCCTG
AATGCCACACTGTTTTAATGACTCCAGAGAAAATACATGAAATTCTTTTT
GGGAACTGCCCTAAGATTCAGTCACAAACGACAGAAGAGAATCAGATTTA
GTTCTTCAAGTCACTTTTCTTACCACCCAAAGTTTCACCTAGCTCATGAC
ACATTTAAATCCAATCTACTTTAATTAAAAAAAAAAAAACCAACCAAACC
AAAAAAACTGTTTACACACAAGACACTCAGGAGAAAATACCTAAGACAAA
GATTCAATCATTGATGGATGTGTTAAAGGAAATGTCTATATAGAAGTTCT
AAACTCACTTAAAATAATCAAGTTGCCACAAAAATTT

Query= MSMg01no494_o02.g1 MSMg01no494_o02.g1 CHROMAT_FILE:
MSMg01no494_o02.g1 PHD_FILE: MSMg01no494_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:50 2005
         (555 letters)



>mm_chr3_132771024_132771975
          Length = 952

 Score = 1011 bits (523), Expect = 0.0
 Identities = 547/557 (98%), Gaps = 6/557 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattttgctgttgatggaccagctgaagaagttttggctgcaaaagctgcccatccagtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 aattttgctgttgatggaccagctgaagaagttttggctgcaaaagctgcccatccagtt 841

                                                                       
Query: 61  aggccactagttaccgaagaggacacgttgttactagaagaatttcctgaaataaccgtg 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 aggccactagttactgaagaggacacgttgttactagaagaatttcctgaaataaccgtg 781

                                                                       
Query: 121 gatggct-aaaaaaaataaaaaatataagtcttacattagagccaaatataatcaacacc 179
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gatggctaaaaaaaaataaaaaatataagtcttacattagagccaaatataatcaacacc 721

                                                                       
Query: 180 tgtatgtctttgaatataaatgcttacttgtatataaagaagtaatgcatggacaatatg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tgtatgtctttgaatataaatgcttacttgtatataaagaagtaatgcatggacaatatg 661

                                                                       
Query: 240 gacaacacaacaaaattaggttcttatgaagctgaattgggaaacacatgggcgtttctg 299
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gacaacaaaacaaaattaggttcttatgaagctgaattgggaaacacatgggcgtttctg 601

                                                                       
Query: 300 tagtcagggagactgctacacaacttgcagttcctgaatgccacactgttttaatgactc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tagtcagggagactgctacacaacttgcagttcctgaatgccacactgttttaatgactc 541

                                                                       
Query: 360 cagagaaaatacatgaaattctttttgggaactgccctaagattcagtcacaaacgacag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cagagaaaatacatgaaattctttttgggaactgccctaagattcagtcacaaacgacag 481

                                                                       
Query: 420 aagagaatcagatttagttcttcaagtcacttttcttaccacccaaagtttcacctagct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aagagaatcagatttagttcttcaagtcacttttcttaccacccaaagtttcacctagct 421

                                                                       
Query: 480 catgacacatttaaatccaatctactttaattaaaaaaaaaaaaaccaaccaaaccaaaa 539
           |||||||| ||||||||||||||||||||||| |||||||||    ||||||||||||||
Sbjct: 420 catgacacttttaaatccaatctactttaatttaaaaaaaaa----caaccaaaccaaaa 365

                            
Query: 540 aaa-ctgtttacacaca 555
           ||| |||||||||||||
Sbjct: 364 aaaactgtttacacaca 348


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 952
Length adjustment: 10
Effective length of query: 545
Effective length of database: 942
Effective search space:   513390
Effective search space used:   513390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)