Query= MSMg01no496_i20.b1 MSMg01no496_i20.b1 CHROMAT_FILE:
MSMg01no496_i20.b1 PHD_FILE: MSMg01no496_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:55 2005
(639 letters)
>mm_chr3_55088983_55090021
Length = 1039
Score = 1152 bits (596), Expect = 0.0
Identities = 626/636 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaatctttctgatgtactattcatcctctctgctttgttttggctaatggattt 63
|||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaatctagccgatgcactattcatcctctctgctttgttttggctaatggattt 263
Query: 64 ctgtacattccttgtattctgctctggatcttcatgtgctttgataggtatgttattttt 123
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 ctgtacattccttgtactctgctctggatcttcatgtgctttgataggtacgttattttt 323
Query: 124 gcaaactaagaatcccttgcttgtccttggacaggttggatgacttctgtccatctcttg 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 324 gcaaactaagaatcccttgcttgtccttggacaggttggatgacttctctccatctcttg 383
Query: 184 ttcattgtctaaaatacatgactgatggctgcgtcagtgttaagatagcatgtgtgaata 243
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 384 ttcattgtctaaaatacatgactgatggctgcgtcagtgttaagataacatgtgtgaatg 443
Query: 244 tctggtgaggtaaacactgaggacccttgaactgcatcagctttccaaaagagccaaatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctggtgaggtaaacactgaggacccttgaactgcatcagctttccaaaagagccaaatc 503
Query: 304 tgtagtggtgaatcagtagctgcctgggctgcaggtagaagcagagactgatgacaaaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtagtggtgaatcagtagctgcctgggctgcaggtagaagcagagactgatgacaaaag 563
Query: 364 aggtttaaaactatattgtcaggctggccattcactgttgaataacccatttagctgaat 423
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aggtttaaaactatattgtcgggctggccattcactgttgaataacccatttagctgaat 623
Query: 424 aattctacagtatataaatacctcaataaagctgtttctgaaagtgtttgctataggcag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aattctacagtatataaatacctcaataaagctgtttctgaaagtgtttgctataggcag 683
Query: 484 aagtagaatattaaaccttgcttcttatgtgctttctaatgcctttaacgatatattttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagtagaatattaaaccttgcttcttatgtgctttctaatgcctttaacgatatattttt 743
Query: 544 attttatgtgtatgaatgttttgcctcatgtatgactgggcatcccatgtgtacagtgac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 attttatgtgtatgaatgttttgcctcatgtatgactgggcatcccatgtgtacagtgac 803
Query: 604 tctagactagatgaggttgtcaaatcccctggaatt 639
||||||||||||||||||||||||||||||||||||
Sbjct: 804 tctagactagatgaggttgtcaaatcccctggaatt 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_i20.g1 MSMg01no496_i20.g1 CHROMAT_FILE:
MSMg01no496_i20.g1 PHD_FILE: MSMg01no496_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:55 2005
(599 letters)
>mm_chr3_55253134_55254132
Length = 999
Score = 777 bits (402), Expect = 0.0
Identities = 431/444 (97%), Gaps = 6/444 (1%)
Strand = Plus / Minus
Query: 1 ttaagcatttaaactttaaactgctttcagcatttagttacggtaataactcagtagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttaagcatttaaactttaaactgctttcagcatttagttacggtaataactcagtagcat 379
Query: 61 ccccataaatgagcatttagtcacctggttatttccctcatatgcgtttagtccttggaa 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 378 ccccataaatgagcatttagtcacctggttatttccctcatatgtgtttagtccttggaa 319
Query: 121 cttgaaattcaatttttagtaactagaagaatacattgtcagtgctcaaaatatttgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cttgaaattcaatttttagtaactagaagaatacattgtcagtgctcaaaatatttgctg 259
Query: 181 aatgagtgggttggaagataaggaattctctccttaaattatttcttaaaaatgtacctt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 258 aatgagtgggttggaagataaggaattctctccttaaattatctcttaaaaatgtacctt 199
Query: 241 tctgtgtttgtgaatgagtacctgcttgcctgtatgcccaccatatgcatgcagtgccca 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tctgtgtttgtga------acctgcttgcctgtatgcccaccatatgcatgcagtgccca 145
Query: 301 tggagaccagaagagggcactggatctcctggatctcgagtgaccaatggttgtgatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tggagaccagaagagggcactggatctcctggatctcgagtgaccaatggttgtgatctg 85
Query: 361 ccatgtgctctgctgggaactcaaccactaactgttaagtcattcctccagctcccataa 420
||||||| ||||||||||||||||||| |||| | ||||||||||||||| |||||||||
Sbjct: 84 ccatgtggtctgctgggaactcaaccattaacggctaagtcattcctccaactcccataa 25
Query: 421 attcttaaaaagtccttgtcctct 444
||||||||||||||||||||||||
Sbjct: 24 attcttaaaaagtccttgtcctct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
