GCTATACGACTCACTATAGTTCGAGAATCCGCGGAATTCATTATGCATTT
CACTTTACAATTAATTTGTGGTCATAGTGCTACTAAAATTTGATGAGTCC
CTTAGTGATCACCAGTTGATAATGAGACTATCTGGGTCCTTTATTGGGGT
TCCTAGTCTCATTAAAATGATAATTTAAGAAAGGATTAAAAAGAATCTAG
AATAGCTATATTGTGTAAAATAAAAACACCCAGATTAGGTGTACTGGCTG
GTTTTATGTGTCAACTTGACACAAACTGGAATTATCACAGAGAAAGGAGT
TTCATTTTAGGAAATGCCTCTATGAGATCCAGCTGTAAGGCATTTTCTCA
ATTAGTGATCAAGTGGGGAGAGCACCTCTGTGGGAGGTACCATCACTGGG
CTGGTAGTCTTGGGTTCTATAAGAAAGCAATTTGAGCAAGCCAGTATAAA
ACATCCCCCCACGGTCTCTGTATCAGTTCCTGCTTCCTGACCTGCTTGAG
TTCCAGTCCTGACTTCCTTTGGTGATGAACAGTGCTTTGGAAGTGTAAAC
TGAATACACCCTTTCCTCTCCAACTCACTGCTTGGTACTGATGCTTTGTC
CAGGAATAGAAACCCTGACCAAGACAGCAGGCAAGTGGCACATCTCAGCA
GGTGCCTGGAATAGACAGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCG
AGAAATCAGAAGGCATTTAAAGGTGGTCTTCTATATCATGCTTAAAGGTA
TTGACATAACAATTCACTCAGAACAGTTTTCCACATTTAAAACGAACACA
GATGTATTTAAAAAGATATAATTGTGATTTTTTTCCTGTTTTTTTTATCT
AGTATATGTTGTAATTTATACCTCGGAAGGCATGTTCTTTTGAAATGCCT
TTGAAATTTTTCTGATTAGTAGATATATTGTCTATAATTTTTACAGAATG
TAATTTTAAACTTTATTAAAATAAACCCTAAGGTAAACTGAATCATAACA
TGCTTTCCGTAAGGTACTTGACCATGCAAGTATCAGTGAACATTAAATCA
GTTATTGTATTTTTTATTTTAGAAGTTGTAAGTACAAATGCCAACATACT
ACTCCTGCTGGTTCAGGCTCTAAGTCTATAAACAAAACGGAAACGCACAC
ACACACACACACACACACACACACACGCACACACACCACCTCAGCTCTCT
GAGCTATAGTGCCAAAGTGCCTTTTGGTAAAACACTAGATAACTGTCTCT
AAAGCCTGGCCAGGGGGTTCCCTGGAGTAGAGACAAAAGCTTACTACAGG
CTTGGTAGCCTC

Query= MSMg01no500_a09.g1 MSMg01no500_a09.g1 CHROMAT_FILE:
MSMg01no500_a09.g1 PHD_FILE: MSMg01no500_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:35 2005
         (565 letters)



>mm_chr3_81819691_81820654
          Length = 964

 Score =  961 bits (497), Expect = 0.0
 Identities = 549/567 (96%), Gaps = 7/567 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaggcatttaaaggtggtcttctatatcatgcttaaaggtattgacataacaattcactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aaggcatttaaaggtggtcttctatatcatgcttaaaggtattgacataacaattcactc 567

                                                                       
Query: 61  agaacagttttccacatttaaaacgaacacagatgtatttaaaaagatataattgtgatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agaacagttttccacatttaaaacgaacacagatgtatttaaaaagatataattgtgatt 507

                                                                       
Query: 121 tttttcctgttttttttatctagtatatgttgtaatttatacctcggaaggcatgttctt 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tttttcctg-tttttttatctagtatatgttgtaatttatacctcggaaggcatgttctt 448

                                                                       
Query: 181 ttgaaatgcctttgaaatttttctgattagtagatatattgtctataatttttacagaat 240
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 447 ttgaaatgccttttaaatttttctgattagtagatatattgtctataatttttacagaa- 389

                                                                       
Query: 241 gtaa-ttttaaactttattaaaataaaccctaaggtaaactgaatcataacatgctttcc 299
           | || |||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 388 ggaatttttaaactttattaaaataaaccctaaggtaaactgaatcagaacatgctttca 329

                                                                       
Query: 300 gtaaggtacttgaccatgcaagtatcagtgaacattaaatcagttattgtattttttatt 359
           ||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||
Sbjct: 328 gtaaggtacttgaccatgcaagtatcagtgaatgttaactcagttattgtattttttatt 269

                                                                       
Query: 360 ttagaagttgtaagtacaaatgccaacatactactcctgctggttcaggctctaagtcta 419
           ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 268 ttagaagttgtaagtactaatgccaacatactactcctgctggttcaggccctaagtcta 209

                                                                       
Query: 420 taaacaaaac-ggaaacgcacacacacacacacacacacacacacacacgcacacacacc 478
           |||||||| | ||||  ||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 208 taaacaaa-ctggaa--gcacacatacacacacacacacacacacacacacacacacacc 152

                                                                       
Query: 479 acctcagctctctgagctatagtgccaaagtgccttttggtaaaacactagataactgtc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 acctcagctctctgagctatagtgccaaagtgccttttggtaaaacactagataactgtc 92

                                      
Query: 539 tctaaagcctggccagggggttccctg 565
           |||||||||||||||||||||||||||
Sbjct: 91  tctaaagcctggccagggggttccctg 65


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 964
Length adjustment: 10
Effective length of query: 555
Effective length of database: 954
Effective search space:   529470
Effective search space used:   529470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)