GCTATACGACTCACTATAGTTCGAGGATCCGCGGAATTCTCGGGAGTTTG
GGATGTTATCAGAGTAGAAGATCTATTTCCTTTCCTGACCAAGAAGAAAA
CATTTATTACTGTGAAATTACCTAGAATGGATGGGTTGCCTGGAGGCTAA
AATTCTAACAATATTCCTATTTCACATCTCAATACTGCACGACTGGTCAC
TAGCACTATGGGAACAGCAAAGTGAACTCAAATGCAAAAGACATGGGTGT
CAGAAGAAGAGATAAATGGATGCAGCATGAGTTCAGGTCCACGCTATTGA
CAAGGTATACTTTCTCTCAAGATGATGAGACCCCAAAATGGCAGAATCCA
GGCTCTACCAAAATAAGGGACACAAAATGTCCTCAACCATACCTGTGAAT
ACATGCAGAATGCCCTACTAAATTTTCAGTTTGGATAAAAGCTTTCCTCT
GGGCACCCTGAGTCCAGAGGAAAATACTCTCTAGGATCTGTTGCAGAAAA
CGTCCTCACGTAATAAAAGGTAAGACCCCAGACTGAAAAGCACCCTCCCC
TAAGTCGATCTGAACACCATTATGATGTTATTTTGAGAAGATGACTATTG
CGGTGGTGTGGGTGGTGTGTCCTGCTGATGATTGACATGTGTGTTAGGTG
AGACAGGAACTCTGAGAGCCTGCANGCAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTAGTAAATCTTTAATTTATTTCTTTATTTCTTCCTTGACCTGA
TATCATCAGGTAGAGAGTTGTTGAGTTTCCATGCGTTTGTTGTCTCTGTT
GCTTCTGTTGTTGTTGACATCCAACTTCAATTCATGGTGATTTGATAAGA
TATAGGGGTTATTTCAATTTCCTTGTATGTGTTGAAACTTGCTTTGTGAC
TGATTACATGGTCAAATTCAGATAAAGTTCTCTGAGGTTCTAGGAAGACA
GCATATTCTTTTCTGTCTGAGTGAAAAGTTCCGTAGATATCTGTTAGGTC
AATTAATGTCATAACATTTGTTTAGCTATTTATTTAATTTCAGTCTAGGT
GACCTGTCTTTGGTGAGAGTAGAATGTTGAAGTCTCCACATGTTAATGTG
TGGAGTTTGATGTGTGATTTAAGCTTTAGTGTTCTAATCACATTTGTAAA
ACTGTAGGTGCGCTTACATTTGGGGTATAGTTGTTCATAATCAAGACAGC
ATTTTGGTGATTTTTTCATCAGATGAATATGAACTATCTTTTCCTGTCTC
TTTCGATTAATTTTGGNTGAAAATTTATTTTAGTAGCTATTTGAATGGCT
ACTCCAGCTTGTTTCTTTGGGTCCATTTGCTTG

Query= MSMg01no500_h20.b1 MSMg01no500_h20.b1 CHROMAT_FILE:
MSMg01no500_h20.b1 PHD_FILE: MSMg01no500_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:08 2005
         (639 letters)



>mm_chr3_29624579_29625617
          Length = 1039

 Score =  621 bits (321), Expect = 0.0
 Identities = 377/397 (94%), Gaps = 6/397 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattctcgggagtttgggatgttatcagagtagaa-gatctatttcctttcctgaccaa 64
           ||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||||
Sbjct: 599 gaattctcgggagcttgggatgatatcagagta-aaggatctatttcctttcctgaccaa 541

                                                                       
Query: 65  gaagaaaacatttattactgtgaaattacctagaatggatgggttgcctggaggctaaaa 124
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 540 gaagaaaacatttattactgtgaaattacctagaatagatgggttgcctggaggttaaaa 481

                                                                       
Query: 125 ttctaacaatattcctatttcacatctcaatac--tgcacgactggtcactagcactatg 182
           |||||||||||||| || ||||||||||||| |  ||||  |||||||||||||||||||
Sbjct: 480 ttctaacaatattcttagttcacatctcaatgctgtgca--actggtcactagcactatg 423

                                                                       
Query: 183 ggaacagcaaagtgaactcaaatgcaaaagacatgggtgtcagaagaagagataaatgga 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggaacagcaaagtgaactcaaatgcaaaagacatgggtgtcagaagaagagataaatgga 363

                                                                       
Query: 243 tgcagcatgagttcaggtccacgctattgacaaggtatactttctctcaagatgatgaga 302
           ||||||||||| ||||||||||  || |||||||||||||||||||||||||||||||||
Sbjct: 362 tgcagcatgagctcaggtccacattactgacaaggtatactttctctcaagatgatgaga 303

                                                                       
Query: 303 ccccaaaatggcagaatccaggctctaccaaaataagggacacaaaatgtcctcaaccat 362
           |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||
Sbjct: 302 ccccaaaatggcagaatccaggctctaccaaaatgagggacacaaaatgttctcaaacat 243

                                                
Query: 363 acctgtgaatacatgcagaatgccctactaaattttc 399
           |||||||||||||||||||||||||||||||||||||
Sbjct: 242 acctgtgaatacatgcagaatgccctactaaattttc 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)