XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAAT
AATTTCCCTTCTCTAAAGTACCATAAAGTAGCCATAAAGTTTGTATTTTC
TGCTAGGATATATATATATCCTATATATACACAAAAATATATTTCTTGTT
CTAACCACACAGACTCTAGCCACTCTTCAGTATGCGTATTTAATAAAAAG
CTTTTCCTAAATCCATATAGGGAAACTGGACTCAAATCTTAATCTGAACA
TAAACCCTGTTTGCAAATTAGAACCCAAATCCTAAACTTTCTGAGGATTG
TCCATGGCTCCTGGAGTGCCATTGTCATTCTGATTTAAAACCTCAGCCTC
TACATCTTTTAAAAGTGATTGATATCTCTTTGTGCCATTAAATACAAAAG
CTTTTAAATGATTTTCCCCTTCAATGTGCCCATAAGTGGAACTAAATATT
TAGATTGCCTAAAATGGAGAGGATGTACTTTACATGAAATTAGACCTACT
AAAAGAGTGTTAAGTTAAATCATTTTAGTATAGTACAACTCAATGAACAG
AATCAATTTCTACAGGTAAACTAAAACTAATAATGGGATTCAGTAATTTC
TATCTATGAGCTAACTGTTTGCTAAGTATTAAGGCACTGCATCAATTAAT
ATTTGGCTTGGCTGATACAATGGAGACTTAAGAGAGGTTTTAAATTATTG
TTTGTTTGTTTGTTTGTTTGTTTTTGTT

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATTGTTTTCAATAGCTAAGTAGTAC
ATCATTGTGTAAAGGGACCACATTTTCTGCATCTATTCCTCTGTTGAGGA
TCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTACTATGA
ACATAGTGGAGCATGTATCTTTATTACAATTTGGAGCATCTTCTGGGTAT
ATCCCCAGGAATGGTATTGCTGGATCTTCTGGTAGTACTATGTCCAATTT
TCTGAGGAACCACCAGACTGACTTCCAGATTGTTTGTACCAACTTCCAAT
CCAACTAACAATGAAGGAGTCTTTCTCCACATCCTTGACAGCATCTTCTG
TCACCTGAGTTTTTGATCTTAGCTGCTCTGACTTGTGTGAGGTGAAAACA
CAGGGTTGTATTGATTTGCATTTCCTTGATTACTAAGGCTGTTGAACATT
TCTTTAGGTGCTTCTCACAAGTCCATATTCCTAAGTTGAGAATTATTTGT
TTAGAACCCGTACCCCATTTTTAAATTAGATTATTTGACTCTCTGAAGTT
TAACTTCTTGAGTTATTCATATATATTTGATATTAGCCCTCTATTAGATG
TAGGATTGGTAAAGATCTTTACCCAGTCTGTTCGATGTTGTTTTGTCCTA
TTCACAGTATCCTTTGCCTTACAGAAGCTTTACAT

Query= MSMg01no502_m02.b1 MSMg01no502_m02.b1 CHROMAT_FILE:
MSMg01no502_m02.b1 PHD_FILE: MSMg01no502_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:52 2005
         (641 letters)



>mm_chr3_110684553_110685593
          Length = 1041

 Score = 1154 bits (597), Expect = 0.0
 Identities = 638/671 (95%), Gaps = 30/671 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctaaagtaccataaagtagccataaagtttgtattttctgctaggatatatatatat-- 58
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 171 tctaaagtaccataaagtagccataaagtttgtattttctgctaggatatatatatatat 230

                                                                       
Query: 59  ----------------------------cctatatatacacaaaaatatatttcttgttc 90
                                       ||||||||||||||||||||||||||||||||
Sbjct: 231 atatatatatatatatatatatatatatcctatatatacacaaaaatatatttcttgttc 290

                                                                       
Query: 91  taaccacacagactctagccactcttcagtatgcgtatttaataaaaagcttttcctaaa 150
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 taaccacacagactttagccactcttcagtatgcgtatttaataaaaagcttttcctaaa 350

                                                                       
Query: 151 tccatatagggaaactggactcaaatcttaatctgaacataaaccctgtttgcaaattag 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tccatatagggaaactggactcaaatcttaatctgaacataaaccctgtttgcaaattag 410

                                                                       
Query: 211 aacccaaatcctaaactttctgaggattgtccatggctcctggagtgccattgtcattct 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aacccaaatcctaaactttctgaggattgtccatggctcctggagtgccattgtcattct 470

                                                                       
Query: 271 gatttaaaacctcagcctctacatcttttaaaagtgattgatatctctttgtgccattaa 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gatttaaaacctcagcctctacatcttttaaaagtgattgatatctctttgtgccattaa 530

                                                                       
Query: 331 atacaaaagcttttaaatgattttccccttcaatgtgcccataagtggaactaaatattt 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atacaaaagcttttaaatgattttccccttcaatgtgcccataagtggaactaaatattt 590

                                                                       
Query: 391 agattgcctaaaatggagaggatgtactttacatgaaattagacctactaaaagagtgtt 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agattgcctaaaatggagaggatgtactttacatgaaattagacctactaaaagagtgtt 650

                                                                       
Query: 451 aagttaaatcattttagtatagtacaactcaatgaacagaatcaatttctacaggtaaac 510
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 651 aagttaaatcattttagtatagtacaactcaatgaactgaatcaatttctacaggtaaac 710

                                                                       
Query: 511 taaaactaataatgggattcagtaatttctatctatgagctaactgtttgctaagtatta 570
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 taaaactaataatgggattcagtaatttctatctatgagctaactgtttgctaagtatta 770

                                                                       
Query: 571 aggcactgcatcaattaatatttggcttggctgatacaatggagacttaagagaggtttt 630
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 771 aggcactgcatcaattaatatttggcttggctgatacaatggaggcttaagagaggtttt 830

                      
Query: 631 aaattattgtt 641
           |||||||||||
Sbjct: 831 aaattattgtt 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space:   650561
Effective search space used:   650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)