Query= MSMg01no502_n04.b1 MSMg01no502_n04.b1 CHROMAT_FILE:
MSMg01no502_n04.b1 PHD_FILE: MSMg01no502_n04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:57 2005
(626 letters)
>mm_chr3_75641789_75642814
Length = 1026
Score = 1017 bits (526), Expect = 0.0
Identities = 594/626 (94%), Gaps = 18/626 (2%)
Strand = Plus / Plus
Query: 1 aggactctatcacaggctttataacggttaagtattaaaaagttataaactattcagata 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 aggactctatcacaggctttataatggttaagtattaaaaagttataaactattcagata 260
Query: 61 gaaatatgtaacaattaattgtagcaaattgtaatgtaggaaatgcttaagaatggaaga 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gaaatatgtaacaattaattgtagcaaattataatgtaggaaatgcttaagaatggaaga 320
Query: 121 ttaatcttaatttaagacaaataatgggatacacgtgcaaaaagctacctgatagcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaatcttaatttaagacaaataatgggatacacgtgcaaaaagctacctgatagcaaac 380
Query: 181 ttacaaactggtcacacatcttaaaaatattgtcgttaattttaatttaaaaacacagga 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ttacaaactggtcacacatcttaaaaatattgtcattaattttaatttaaaaacacagga 440
Query: 241 tgaaaattaattataatttgaaagttctttcagttgtaataaaatgaaaaataggacact 300
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 441 tgaaaattaattataatttgaaagttctttcagttgtaataaaataaaaaattggacact 500
Query: 301 gttactaccattgtgaaagctaaccagatttatacatgtctaagggatcaagatatgttg 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 501 gttactaccattgtgaaagctaaccagatttatatatgtctaagggatcaagagatgttg 560
Query: 361 tatagttatttaatcaaaaaattagccacattttcattacagaacaaaactttctttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatagttatttaatcaaaaaattagccacattttcattacagaacaaaactttctttttt 620
Query: 421 ctttttctcttctttttctttcttctctttccttttcttttcttttcttttcttttctct 480
| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 ccttttctcttctttttctttcttctctttccttttcttttctcttcttt---------- 670
Query: 481 tctttctttctttctttctttctttctttctttctttctttctttctttctttctttttg 540
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 671 -ctttctttctttctttctttctttctttctttctttctttctttctacctttttttttg 729
Query: 541 gtgttgtgtttgctaaacatgtaaaaattatcactgaagcagacttcaagtgttttgtga 600
|||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||
Sbjct: 730 gtgttgtgtttgctaaac--gtaaaaattgtcagtgaagcagacttcaagtgttttgtg- 786
Query: 601 ctttcaagtttttactatgtaaaagt 626
||| |||||||||||||||||||
Sbjct: 787 ---tca-gtttttactatgtaaaagt 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_n04.g1 MSMg01no502_n04.g1 CHROMAT_FILE:
MSMg01no502_n04.g1 PHD_FILE: MSMg01no502_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:57 2005
(332 letters)
>mm_chr3_75852258_75852990
Length = 733
Score = 530 bits (274), Expect = e-155
Identities = 319/334 (95%), Gaps = 3/334 (0%)
Strand = Plus / Minus
Query: 1 gtcacgcatgttgaatttgaagtgagcatagtttcccatccttgttatttatagtttatg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 533 gtcacgcatgttgaatttgaagtgagcataggttcccatccttgttatttatagtttatg 474
Query: 61 aaatgaaaatgagaaccctaagagtataggcataaaacttcatggataaaaaaaatggtg 120
||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 473 aaatggaaatgagaaccctaagagtataggcataaaaattcatggat-aaaaaaatggtg 415
Query: 121 tcattaaagtagaaggggttgtagttaaaaggggatgggagtggaagaggcgttgacaag 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 414 tcattaaagtagaaggggttgtagttaaaaggggataggagtggaagaggcgttgacaag 355
Query: 181 tgaatgtgactgaaaaacaggatgcatgatatggtgctatgcaaaggtc-taaaaagtca 239
|||||||||||||||||||||||||||| ||||||| |||||||||||| |||| || ||
Sbjct: 354 tgaatgtgactgaaaaacaggatgcatgctatggtgttatgcaaaggtcataaagagaca 295
Query: 240 attattttgcataaacagtgaaacctaataaaacatttt-aaaagaaaggaaactttcat 298
||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
Sbjct: 294 attattttgcataaacagtgaaacctaataaaacatttttaaaagaaagaaaactttctt 235
Query: 299 atgataatgatttaaactagacgtgttaatgcac 332
||||||||||||||||||||| |||||||||||
Sbjct: 234 atgataatgatttaaactagatttgttaatgcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 733
Length adjustment: 9
Effective length of query: 323
Effective length of database: 724
Effective search space: 233852
Effective search space used: 233852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
