NGGGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACATTTTACATCACTTAGTTTAGCAGTGGTTAACAATG
GTTAATTATACAGAAATTGTTTTCTTTGATCACTTAAACTTTGCTAAAAT
TTTTATTTAGGTTAGCCTCTCTAAGTGTGAATGATCTTCACTTTTGCCCT
TTAGAACAGTTTGTGTTACAAAATTTTAGAACATGATTCAGCTGTTTAAA
TAGAAATAGTGGATTCTCTTAAGCAATGTTGCTTTCTCTGAACCCAGAGG
CACATTTAATTTGTGGATTAGGACTCTGAATAGTGCAACTGCCAGCATGC
TTATGTCTGCTTTGTGCAAGACCAAGAACAAGGTCAGTACAAATGCTCTA
AACAGTATCAGAGAAGTTGTGGAGAATACATATTCCCTGTTTGTGACAGT
TTTTTTTTTTTTTTTTTAATTAAGCCTACTGTGTTCTAAATGGTGCCTGG
TCTAATTCTTTGTCTTAGATGTCTAAGTCAATGCAGACTGTTACTGGCTC
GTGGAGACTTTAAGGATGAAGTAAATGTTAGAATTCTTTCAACTCACGAC
TGCTTAACTAATATTCCTAACTTTCCGTTGCTATTAACCTGTAAAACATT
GTTGTCTCAGGGTCCAATCTGCACAGAATGCAGGATGAGAGTATTCATTT
GTGTGCTCACTTCCCTTCATCTCCATCCACTTACAGATTGAG

AAAACCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAAAAGAGGAGTCTCAA
ATGGCTTAGAAACACTTAAATATTCAAAAAGTCCTTAGTGATCAGAGAAA
TGCAAATCAAAATGACCCCGAGATTCTACTTTACACCAATAAGAACGACT
AAGAGCAAAACCTGAGGTGATAGCACATGTTGGCCAGGATGTGAAGAAAG
AGGAACACTCTTCCATTGCTGGTGGGATTGCAAACTTGTGCAACTATTCA
GCGTATCATTCTGGAATATCCTCAGAAAATTGGAAATAGATCTACCTGAA
GACCCAGAAATATACCTTGGGAGTATACTCGAAAGATGGCCCACCATGCC
ACAGGGGCATGTGTTCCACTATGTTCATAGTGGCCTTGTTTGTGATAGAC
AGAAGCTGGAAACAACCCAGATGTCCCATGACAGAAGAATAGATACAGAA
AATGTGGTTCATTTACACAATGGAATACTACTCAGCTATTAACAACAAGG
ATATCCTGACTTTTGCAGGCAAATGGATGGAACTAGAAAATATCATCCTG
AGTGAGGTAACTCAGACCCAAAAGGGTATGCCTGGTATGTACTCACTAAT
AAGTGGATATTAGCTCCCCAAAAGTACAGAATACCCATGGTAAAGTCCAC
GGAATATCAAAAGGTTAACAAGCTGAAGGGACCTACTAATGATGN

Query= MSMg01no504_g01.b1 MSMg01no504_g01.b1 CHROMAT_FILE:
MSMg01no504_g01.b1 PHD_FILE: MSMg01no504_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:58 2005
         (630 letters)



>mm_chr3_7815677_7816706
          Length = 1030

 Score = 1152 bits (596), Expect = 0.0
 Identities = 618/626 (98%), Gaps = 2/626 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacattttacatcacttagtttagcagtggttaacaatggttaattatacagaaa 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatttgaaatcacttagtttagcagtggttaacaatggttaattatacagaaa 264

                                                                       
Query: 65  ttgttttctttgatcacttaaactttgctaaaatttttatttaggttagcctctctaagt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgttttctttgatcacttaaactttgctaaaatttttatttaggttagcctctctaagt 324

                                                                       
Query: 125 gtgaatgatcttcacttttgccctttagaacagtttgtgttacaaaattttagaacatga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgaatgatcttcacttttgccctttagaacagtttgtgttacaaaattttagaacatga 384

                                                                       
Query: 185 ttcagctgtttaaatagaaatagtggattctcttaagcaatgttgctttctctgaaccca 244
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcagctgtttaaataaaaatagtggattctcttaagcaatgttgctttctctgaaccca 444

                                                                       
Query: 245 gaggcacatttaatttgtggattaggactctgaatagtgcaactgccagcatgcttatgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaggcacatttaatttgtggattaggactctgaatagtgcaactgccagcatgcttatgt 504

                                                                       
Query: 305 ctgctttgtgcaagaccaagaacaaggtcagtacaaatgctctaaacagtatcagagaag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 ctgctttgtgcaagaccaagaacaaggtcagtacaaatgctctaaacagcatcagagaag 564

                                                                       
Query: 365 ttgtggagaatacatattccctgtttgtgacagttttttttttttttttttaattaagcc 424
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 565 ttgtggagaatacatattccctgtttgtgacagtttttttttttttttt--aattaagcc 622

                                                                       
Query: 425 tactgtgttctaaatggtgcctggtctaattctttgtcttagatgtctaagtcaatgcag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tactgtgttctaaatggtgcctggtctaattctttgtcttagatgtctaagtcaatgcag 682

                                                                       
Query: 485 actgttactggctcgtggagactttaaggatgaagtaaatgttagaattctttcaactca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 actgttactggctcgtggagactttaaggatgaagtaaatgttagaattctttcaactca 742

                                                                       
Query: 545 cgactgcttaactaatattcctaactttccgttgctattaacctgtaaaacattgttgtc 604
           ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 743 cgactgcttaactaatattcctaactttccaatgctattaacctgtaaaacattgttgtc 802

                                     
Query: 605 tcagggtccaatctgcacagaatgca 630
           ||||||||||||||||||||||||||
Sbjct: 803 tcagggtccaatctgcacagaatgca 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space:   632400
Effective search space used:   632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)