NCTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTATGGGCATATTATAATCACGCTTTGAATCTAAGTAATCCTTA
TGTGGATCCACTAATTTCTATTGATATTTTTTTTTAACCAGAGCCAATTT
CCCCTCAGCCTCAGCTTACAATTTTCTTGGACAACTTAAATTTGTTATTA
CCTTGTAAACTTTGAAATTAATTATGCAGTTCTTGAGTAGTAAATCCAGT
TCTAGACTTTAGCCAGTTAATATCTCCCATTAAGAAAATCATTAAGAGTT
TGTAATTGATCTCTCCTGATTTGTAATTTTTGTGATCAAATTTTCAGTAA
ACCTGTCTTATATGCTATATAAGTCATCGATCCTCCTCTGTGTATTTTTT
CAAAAGCAATTGATAGTCCCGTGAAAGTCAAAATTGCTTCATCAAACATA
TTTTTTCTAAGTTAGCTGTGTCTGAGTCAGGCAGTAAGATATCATCATAT
AATGATATATTTTATTTTGAGGAAACTATTTATAAATTATTTCTAACAGC
TTTCATAAAAAATGTTAACATAGTGTTGGAATTTTGAGCATTCCTTGTGG
AAGAACCTCTCAGTGATACCTTTTAACAAGTTGACCATTATTATAAGTAG
TCATTGTAAAAGCAAACTTTTCTTTATTCTGTTTTCATGAAGATATAGTA
AAAAAGAATGGCTCTTAAATCTGTTAACATTCTTCATTTCCATATTTGTT
TTTAATAAGA

CCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAGACACTGTTCATGTTAGTCTTTG
TGGAGGAAGAATTTTGAGGAGGAAGCTACACAATTGGGGTTTGCATCCTG
GGTTGTTGTTGCAGATCATACGGCAGTGTTCTTTGTCTTTTATTTTTTTT
TAAGTTTTAACTATATGTACATGTCTATGTGTGAGTATATCCATGTGGAG
GCCAGAAGAATTGAATCCACTTGGAGCTGGAATTACAGACAATTCTGAGC
CAAACCTGAATCAACTGCAAAAGCAATACCCACTTGAAACTGTTGAGTCA
TATCACTAGACCACTTAGGTCTATTTTAATAAGTGTCTGAGCATTCTTTA
TTTGTATATTCTGCCTCTCACTACAGATGAACAGCTCTGACCTTCCCATA
TGTGCATATAAATGAAGCTGATTTCATACTCATTTACTCAGAAATGTTAC
AGTATCCCTAGAAACATGTACTCATGGGCACCAGATGAAAAAATAACATG
AAAAGCTCATTGGCTATGATTGCACTATGTCAGATGAATCAAGGAAAACC
CAATTACATGAGGAGTAGTGAATTCTATAGATAGTTGTGGTGTGCTAAAA
GAGAATGAAGTAATAATTCTTAGTTACAATTTTCTTGAAACATTTCCGCA
TATCTTACATTTTCTCCCCAAATATACTAATGGCCTTATAACTGAGTTAC
CTCTCCT

Query= MSMg01no507_f02.g1 MSMg01no507_f02.g1 CHROMAT_FILE:
MSMg01no507_f02.g1 PHD_FILE: MSMg01no507_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:49 2005
         (589 letters)



>mm_chr3_23807702_23808690
          Length = 989

 Score = 1017 bits (526), Expect = 0.0
 Identities = 549/558 (98%), Gaps = 3/558 (0%)
 Strand = Plus / Minus

                                                                       
Query: 32  aagaattttgaggaggaagctacacaattggggtttgcatcctgggttgttgttgcagat 91
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 aagaattttgaggaggaagctacacaattggggtttgcatcctgggttgttgttgcagat 930

                                                                       
Query: 92  catacggcagtgttctttgtcttttatttttttttaagttttaactatatgtacatgtct 151
           |||| ||||||||||||||||||   |||| ||||||||||||||||||||||| |||||
Sbjct: 929 catatggcagtgttctttgtctt---ttttcttttaagttttaactatatgtacctgtct 873

                                                                       
Query: 152 atgtgtgagtatatccatgtggaggccagaagaattgaatccacttggagctggaattac 211
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 872 atgtgtgagtatatccatgtggaggccagaagaattgaatccacttggagatggaattac 813

                                                                       
Query: 212 agacaattctgagccaaacctgaatcaactgcaaaagcaatacccacttgaaactgttga 271
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 812 agacaattctgagccaaacctgaatcaactgcaaaagcaatacccacgtgaaactgttga 753

                                                                       
Query: 272 gtcatatcactagaccacttaggtctattttaataagtgtctgagcattctttatttgta 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gtcatatcactagaccacttaggtctattttaataagtgtctgagcattctttatttgta 693

                                                                       
Query: 332 tattctgcctctcactacagatgaacagctctgaccttcccatatgtgcatataaatgaa 391
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tattctgcctctcactacagatgaacagctctgaccttcccatatgtgcatataaatgaa 633

                                                                       
Query: 392 gctgatttcatactcatttactcagaaatgttacagtatccctagaaacatgtactcatg 451
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gctgatttcatactcatttactcagaaatgttacagtatccctagaaacatgtactcatg 573

                                                                       
Query: 452 ggcaccagatgaaaaaataacatgaaaagctcattggctatgattgcactatgtcagatg 511
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggcaccagatgaaaaaataacatgaaaagctcattggctatgattgcactatgtcagatg 513

                                                                       
Query: 512 aatcaaggaaaacccaattacatgaggagtagtgaattctatagatagttgtggtgtgct 571
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 512 aatcaaggaaaacccaattacatgaagagtagtgaattctatagatagttgtggtgtgct 453

                             
Query: 572 aaaagagaatgaagtaat 589
           ||||||||||||||||||
Sbjct: 452 aaaagagaatgaagtaat 435


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)