Query= MSMg01no511_h01.b1 MSMg01no511_h01.b1 CHROMAT_FILE:
MSMg01no511_h01.b1 PHD_FILE: MSMg01no511_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:19 2005
(134 letters)
>mm_chr3_53114900_53115435
Length = 536
Score = 197 bits (102), Expect = 2e-55
Identities = 127/136 (93%), Gaps = 2/136 (1%)
Strand = Plus / Plus
Query: 1 atatgcattgtattattatatccattctcctcccttacaattgcttccaaacacccatac 60
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||
Sbjct: 201 atatgcattgtattattatatccattctcctcccctacaactgcttccaaacacccacac 260
Query: 61 tctctttcctacttcatattctcattacagtcaaaataa--tccaccgaatctaattgtg 118
||||||||||||||||||||||||||||||| |||| || ||||| || ||||||||||
Sbjct: 261 tctctttcctacttcatattctcattacagttaaaaaaaaatccactgactctaattgtg 320
Query: 119 ctttgtatatgcacag 134
||||||||||||||||
Sbjct: 321 ctttgtatatgcacag 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 536
Length adjustment: 8
Effective length of query: 126
Effective length of database: 528
Effective search space: 66528
Effective search space used: 66528
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no511_h01.g1 MSMg01no511_h01.g1 CHROMAT_FILE:
MSMg01no511_h01.g1 PHD_FILE: MSMg01no511_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:19 2005
(144 letters)
>mm_chr3_53262446_53262989
Length = 544
Score = 232 bits (120), Expect = 6e-66
Identities = 138/144 (95%)
Strand = Plus / Minus
Query: 1 attaatacatctccaggtttgcttataccgtattaaaggctgctagctgccatctgtcac 60
||||||||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||
Sbjct: 344 attaatacatctccaggtttgctcataccgtatgaaaggctgctagttgccacctgtcat 285
Query: 61 acttaagtatgggaatctcttggctcccattgctgttcatcctagtgagagatttgcctt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 284 acttaagtatgggaatctcttggctcccattgctgttcagcctagtgagagatttgcctt 225
Query: 121 tagcttatggaagatgtgaacgct 144
||||||||||||||||||||||||
Sbjct: 224 tagcttatggaagatgtgaacgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
