Query= MSMg01no511_m07.b1 MSMg01no511_m07.b1 CHROMAT_FILE:
MSMg01no511_m07.b1 PHD_FILE: MSMg01no511_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:43 2005
(285 letters)
>mm_chr3_65542271_65542955
Length = 685
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%)
Strand = Plus / Plus
Query: 1 cctactttgccttctcaaatgctgggattaagggtgtatgccatcagcctggatggatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctactttgccttctcaaatgctgggattaagggtgtatgccatcagcctggatggatca 260
Query: 61 catccttggttgtactctgtgccatcctttaatagattctctttcctgtgacctgctgtc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 catccttggttgtactctgtgccatcctttaagagattctctttcctgtgacctgctgtc 320
Query: 121 atcatctgctggccatcttgcttctgctcccaggtctgtcctgtgcatttccacttctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 atcatctgctggccatcttgcttctgctcccaggtctgtcctgtgcatttccacttcgag 380
Query: 181 ctttccttcatgtgtatatgtagtaaaccccaagagcaataaaccaggccaacatgatga 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttccttcatgtgtagatgtagtaaaccccaagagcaataaaccaggccaacatgatga 440
Query: 241 gatacccagtcacacctgaacccactacacaacttataaggggct 285
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 gatacccagtcacacctgaacccactacacaacttagaaggggct 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no511_m07.g1 MSMg01no511_m07.g1 CHROMAT_FILE:
MSMg01no511_m07.g1 PHD_FILE: MSMg01no511_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:43 2005
(408 letters)
>mm_chr3_65739985_65740792
Length = 808
Score = 613 bits (317), Expect = e-180
Identities = 332/337 (98%), Gaps = 1/337 (0%)
Strand = Plus / Minus
Query: 1 accgtttgccaaaagtcgtgagttccacctatgcgagtatttttagtgcaatgaagaaag 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 337 accgtttgccaaaagtcgtgagttccacctatgcaagtatttttagtgcaatgaagaaag 278
Query: 61 agatttgagagttttaggaaaacatccctgaagatcatgataacagaaggtatattacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 277 agatttgagagttttaggaaaacatccctgaagatcatgataacagaaggtatattatgc 218
Query: 121 atcagcaaaagtgatactttc-tttttttaaagatttatttattttctgtatatgagtac 179
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 217 atcagcaaaagtgatactttctttttttttaagatttatttattttctgtatatgagtac 158
Query: 180 accgttgctgtcttcagacacagcaggagagggcatcagatcccattacagatggttgtg 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 accattgctgtcttcagacacagcaggagagggcatcagatcccattacagatggttgtg 98
Query: 240 agccaccatgtggttgctgggatttgaactcaggaccttcggaagagcagtcagtgctct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 agccaccatgtggttgctgggatttgaactcaggaccttcggaagagcagtcagtgctct 38
Query: 300 taaccactgagccatctctccagcccccaaaagtgat 336
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 taaccactgagccatctctccagcccccaaaagtgat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
